RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PRRT1Q99946 306 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 SLX1AQ9BQ83 275 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 HSF4Q9ULV5 492 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 ST3GAL6Q9Y274 331 aa22.72■■□□□ 1.23
LDB1-202ENST00000425280 IGLV1-44P01699 117 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 PMP2P02689 132 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 CECR9P0C854 216 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 SULT1A3P0DMM9 295 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 SULT1A4P0DMN0 295 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 ZNF35P13682 527 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 CXCL3P19876 107 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 CA6P23280 308 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 CXADRP78310 365 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 PPA1Q15181 289 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 MICBQ29980 383 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 DOLPP1Q86YN1 238 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 Q8NFD4 153 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 OR1J1Q8NGS3 322 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 RADILQ96JH8 1075 aa22.71■■□□□ 1.23
LDB1-202ENST00000425280 CHATP28329 748 aa22.7■■□□□ 1.23
LDB1-202ENST00000425280 HOGA1Q86XE5 327 aa22.7■■□□□ 1.23
LDB1-202ENST00000425280 EMG1Q92979 244 aaKnown RBP22.7■■□□□ 1.23
LDB1-202ENST00000425280 SLAMF9Q96A28 289 aa22.7■■□□□ 1.23
LDB1-202ENST00000425280 CHST6Q9GZX3 395 aa22.7■■□□□ 1.23
LDB1-202ENST00000425280 GPN1Q9HCN4 374 aaPredicted RBP22.7■■□□□ 1.23
LDB1-202ENST00000425280 AMDHD2Q9Y303 409 aa22.7■■□□□ 1.23
LDB1-202ENST00000425280 RBM11P57052 281 aaKnown RBP22.7■■□□□ 1.22
LDB1-202ENST00000425280 BATF2Q8N1L9 274 aa22.7■■□□□ 1.22
LDB1-202ENST00000425280 ST6GALNAC5Q9BVH7 336 aa22.7■■□□□ 1.22
LDB1-202ENST00000425280 ZNF230Q9UIE0 474 aaPredicted RBP22.7■■□□□ 1.22
LDB1-202ENST00000425280 SLC25A15Q9Y619 301 aa22.7■■□□□ 1.22
LDB1-202ENST00000425280 PRRG2O14669 202 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 RAC2P15153 192 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 BCL3P20749 454 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 ZMYND11Q15326 602 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 ZNF626Q68DY1 528 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 NOXA1Q86UR1 476 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 TMEM200AQ86VY9 491 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 OR10AD1Q8NGE0 317 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 SNRNP40Q96DI7 357 aaKnown RBP22.69■■□□□ 1.22
LDB1-202ENST00000425280 FAAP24Q9BTP7 215 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 ZNF69Q9UC07 566 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 ZNF222Q9UK12 451 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 TMEM82A0PJX8 343 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 OR5B21A6NL26 309 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 SNRPGP15A8MWD9 76 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 PRR30Q53SZ7 412 aaPredicted RBP22.69■■□□□ 1.22
LDB1-202ENST00000425280 GFRALQ6UXV0 394 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 OR52B4Q8NGK2 314 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 MRGPRFQ96AM1 343 aa22.69■■□□□ 1.22
LDB1-202ENST00000425280 IGHV1-18A0A0C4DH31 117 aa22.68■■□□□ 1.22
LDB1-202ENST00000425280 CREBL2O60519 120 aaPredicted RBP22.68■■□□□ 1.22
LDB1-202ENST00000425280 AMY2BP19961 511 aa22.68■■□□□ 1.22
LDB1-202ENST00000425280 GNG3P63215 75 aa22.68■■□□□ 1.22
LDB1-202ENST00000425280 DAZAP2Q15038 168 aaPredicted RBP22.68■■□□□ 1.22
LDB1-202ENST00000425280 ACTBL2Q562R1 376 aa22.68■■□□□ 1.22
LDB1-202ENST00000425280 ELP2Q6IA86 826 aa22.68■■□□□ 1.22
LDB1-202ENST00000425280 MAFIPQ8WZ33 124 aa22.68■■□□□ 1.22
LDB1-202ENST00000425280 MTCH1Q9NZJ7 389 aa22.68■■□□□ 1.22
LDB1-202ENST00000425280 IFNA6P05013 189 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 ALKBH6Q3KRA9 238 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 VAX1Q5SQQ9 334 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 ATPAF1Q5TC12 328 aaPredicted RBP22.67■■□□□ 1.22
LDB1-202ENST00000425280 SEZ6L2Q6UXD5 910 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 MKXQ8IYA7 352 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 FAM169BQ8N8A8 192 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 SULT4A1Q9BR01 284 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 HDHD3Q9BSH5 251 aaPredicted RBP22.67■■□□□ 1.22
LDB1-202ENST00000425280 ALX4Q9H161 411 aaPredicted RBP22.67■■□□□ 1.22
LDB1-202ENST00000425280 AK3Q9UIJ7 227 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 PRR14LQ5THK1 2151 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 F8VVB4 439 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 F8VWA3 439 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 SMLR1H3BR10 107 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 SNU13P55769 128 aaKnown RBP22.67■■□□□ 1.22
LDB1-202ENST00000425280 PSG7Q13046 419 aa22.67■■□□□ 1.22
LDB1-202ENST00000425280 MARS2Q96GW9 593 aaKnown RBP22.67■■□□□ 1.22
LDB1-202ENST00000425280 ZNF486Q96H40 463 aaPredicted RBP22.67■■□□□ 1.22
LDB1-202ENST00000425280 MSTNO14793 375 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 SYNGR1O43759 233 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 C1QBP02746 253 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 MPV17P39210 176 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 PDCD1Q15116 288 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 HAGHLQ6PII5 290 aaPredicted RBP22.66■■□□□ 1.22
LDB1-202ENST00000425280 ZNF573Q86YE8 665 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 KLF14Q8TD94 323 aaPredicted RBP22.66■■□□□ 1.22
LDB1-202ENST00000425280 CAPSLQ8WWF8 208 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 S100PBPQ96BU1 408 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 POM121Q96HA1 1249 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 ASF1BQ9NVP2 202 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 VSIG4Q9Y279 399 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 SPTBN4Q9H254 2564 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 MEIKINA0A087WXM9 373 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 IGHV2OR16-5A0A0B4J2B6 119 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 IQCF6A8MYZ5 107 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 ANXA3P12429 323 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 IGFBP7Q16270 282 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 OR5H2Q8NGV7 314 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 HS3ST6Q96QI5 342 aa22.66■■□□□ 1.22
LDB1-202ENST00000425280 ZNF835Q9Y2P0 537 aa22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms