RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 KRTAP27-1Q3LI81 207 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 ANKDD1AQ495B1 522 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 PRAMEF5Q5TYX0 476 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 LCN12Q6JVE5 192 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 HAGHLQ6PII5 290 aaPredicted RBP4.85□□□□□ -1.63
SDCBP-203ENST00000424270 MSANTD1Q6ZTZ1 278 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 RRM2BQ7LG56 351 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 MAVSQ7Z434 540 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 ADCK1Q86TW2 530 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 RTN4RL2Q86UN3 420 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 TMEM217Q8N7C4 229 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 LRRC75AQ8NAA5 344 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 C11orf65Q8NCR3 313 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 GPR32P1Q8NGA4 272 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 FAM81AQ8TBF8 368 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 OR5P3Q8WZ94 311 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 ANP32BQ92688 251 aaKnown RBP4.85□□□□□ -1.63
SDCBP-203ENST00000424270 ITFG2Q969R8 447 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF488Q96MN9 340 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 KCTD7Q96MP8 289 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 PCDHB16Q9NRJ7 776 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 SLC22A13Q9Y226 551 aa4.85□□□□□ -1.63
SDCBP-203ENST00000424270 MRPS28Q9Y2Q9 187 aaKnown RBP4.85□□□□□ -1.63
SDCBP-203ENST00000424270 C16orf90A8MZG2 172 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 OOSP1A8MZH6 123 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 BUB1B-PAK6H3BSN5 160 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 I3L521 148 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 ITM2AO43736 263 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 IGLV1-51P01701 117 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 IGHG4P01861 327 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 RPS27P42677 84 aaKnown RBP4.84□□□□□ -1.63
SDCBP-203ENST00000424270 CX3CR1P49238 355 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 RPS6KA3P51812 740 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 ABCE1P61221 599 aaKnown RBP4.84□□□□□ -1.63
SDCBP-203ENST00000424270 ESRRGP62508 458 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 KPNB1Q14974 876 aaKnown RBP4.84□□□□□ -1.63
SDCBP-203ENST00000424270 TMEM177Q53S58 311 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 CEP78Q5JTW2 689 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 OGFOD2Q6N063 350 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 SMARCD3Q6STE5 483 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF730Q6ZMV8 503 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 FAM57BQ71RH2 274 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 LYG2Q86SG7 212 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 NRMQ8IXM6 262 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 KIRREL3Q8IZU9 778 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 Q8N1X5 172 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 TPRX1Q8N7U7 411 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 ZNF491Q8N8L2 437 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 RNF152Q8N8N0 203 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 RASSF5Q8WWW0 418 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 FLYWCH2Q96CP2 140 aaKnown RBP4.84□□□□□ -1.63
SDCBP-203ENST00000424270 PGAM5Q96HS1 289 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 LRGUKQ96M69 825 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 KCNJ15Q99712 375 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 NRIP2Q9BQI9 281 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 OR10A2Q9H208 303 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 GAL3ST2Q9H3Q3 398 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 TMEM38AQ9H6F2 299 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 SRD5A3Q9H8P0 318 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 PLEKHA1Q9HB21 404 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 SLC2A8Q9NY64 477 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 DNAJC27Q9NZQ0 273 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 FBXL17Q9UF56 701 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 CYB5R1Q9UHQ9 305 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 HHLA2Q9UM44 414 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 RAP2CQ9Y3L5 183 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 AMMECR1Q9Y4X0 333 aaPredicted RBP4.84□□□□□ -1.63
SDCBP-203ENST00000424270 IER3IP1Q9Y5U9 82 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 WSB1Q9Y6I7 421 aa4.84□□□□□ -1.63
SDCBP-203ENST00000424270 IGHV4OR15-8A0A075B7B6 117 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 A0A087WW49 117 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 HTR3EA5X5Y0 456 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 K7N7A8 449 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 M0R2N4 97 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 MPZL2O60487 215 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 RBMY1CP0DJD4 496 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 TNFRSF1BP20333 461 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 ANOS1P23352 680 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 GABRR1P24046 479 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 CDK2P24941 298 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 NFYBP25208 207 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 PSMB8P28062 276 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 NOS3P29474 1203 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 SLC15A1P46059 708 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 GNG3P63215 75 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 MEF2CQ06413 473 aaPredicted RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 CKAP4Q07065 602 aaKnown RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 ST3GAL3Q11203 375 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 TRIM25Q14258 630 aaKnown RBP4.83□□□□□ -1.64
SDCBP-203ENST00000424270 GRK1Q15835 563 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 ZBED5Q49AG3 693 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 DCXRQ7Z4W1 244 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 MOB3BQ86TA1 216 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 THNSL2Q86YJ6 484 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 ZDHHC21Q8IVQ6 265 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 DEFB125Q8N687 156 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 OR52L1Q8NGH7 329 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 OR4D6Q8NGJ1 314 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 GTF2H4Q92759 462 aa4.83□□□□□ -1.64
SDCBP-203ENST00000424270 SGK3Q96BR1 496 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms