RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 UBE2UQ5VVX9 321 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 OR52N4Q8NGI2 321 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 TMEM203Q969S6 136 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 CEP19Q96LK0 163 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 HES4Q9HCC6 221 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 NOX4Q9NPH5 578 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 TMEM138Q9NPI0 162 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 YAE1D1Q9NRH1 226 aa18.07■□□□□ 0.48
SEC22C-207ENST00000423701 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.07■□□□□ 0.482e-19■■■■■ 51.9
SEC22C-207ENST00000423701 MAGEA13PA6NCF6 341 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 OR2AT4A6NND4 320 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 A8MXK9 166 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 F8VVB4 439 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 F8VWA3 439 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 MAGEB3O15480 346 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 PHF1O43189 567 aaPredicted RBP18.06■□□□□ 0.48
SEC22C-207ENST00000423701 GPX5O75715 221 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 INMTO95050 263 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 NXPH2O95156 264 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 AMY2BP19961 511 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 ZFP36P26651 326 aaKnown RBP18.06■□□□□ 0.48
SEC22C-207ENST00000423701 PITPNBP48739 271 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 LCN2P80188 198 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 SSX1Q16384 188 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 SMIM21Q3B7S5 101 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 UNQ9370/PRO34162Q6UXP9 181 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 FCGR1BQ92637 280 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 CCL13Q99616 98 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 SSBP3Q9BWW4 388 aaPredicted RBP18.06■□□□□ 0.48
SEC22C-207ENST00000423701 KAAG1Q9UBP8 84 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 SF3B6Q9Y3B4 125 aaKnown RBP18.06■□□□□ 0.48
SEC22C-207ENST00000423701 TLN2Q9Y4G6 2542 aa18.06■□□□□ 0.48
SEC22C-207ENST00000423701 A0A1B0GW55 424 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 KIAA1324LA8MWY0 1029 aaPredicted RBP18.05■□□□□ 0.48
SEC22C-207ENST00000423701 TMPRSS2O15393 492 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 ANGPTL7O43827 346 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 FOXH1O75593 365 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 TNFAIP8O95379 198 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 CYB5AP00167 134 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 TFF1P04155 84 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 ALDOBP05062 364 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4L2P0CJ85 424 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4L3P0CJ86 424 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4L4P0CJ87 422 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4L5P0CJ88 424 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4L6P0CJ89 424 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4L7P0CJ90 424 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 BDKRB2P30411 391 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 TGFBR2P37173 567 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DVL1P1P54792 670 aaPredicted RBP18.05■□□□□ 0.48
SEC22C-207ENST00000423701 ZP1P60852 638 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 GNB2P62879 340 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 FAM27D1Q5T7N8 215 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4L9Q6RFH8 374 aaPredicted RBP18.05■□□□□ 0.48
SEC22C-207ENST00000423701 ZNF841Q6ZN19 808 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 GLCCI1Q86VQ1 547 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 MKXQ8IYA7 352 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 ANGPTL6Q8NI99 470 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 TMEM186Q96B77 213 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 CPNE2Q96FN4 548 aaPredicted RBP18.05■□□□□ 0.48
SEC22C-207ENST00000423701 SMURF1Q9HCE7 757 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 DUX4Q9UBX2 424 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 FOXJ3Q9UPW0 622 aa18.05■□□□□ 0.48
SEC22C-207ENST00000423701 IGKV1D-17A0A075B6S4 117 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 IGKV1-12A0A0C4DH73 117 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 A8MV72 311 aaPredicted RBP18.04■□□□□ 0.48
SEC22C-207ENST00000423701 IGKV1D-12P01611 117 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 PSG2P11465 335 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 PSMA1P25786 263 aaKnown RBP18.04■□□□□ 0.48
SEC22C-207ENST00000423701 GABRA5P31644 462 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 ATPAF1Q5TC12 328 aaPredicted RBP18.04■□□□□ 0.48
SEC22C-207ENST00000423701 DDI2Q5TDH0 399 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 SATL1Q86VE3 508 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 FAM216BQ8N7L0 139 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 NKX3-1Q99801 234 aaPredicted RBP18.04■□□□□ 0.48
SEC22C-207ENST00000423701 HIF1ANQ9NWT6 349 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 CLN8Q9UBY8 286 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 ZNF222Q9UK12 451 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 KCNS2Q9ULS6 477 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 MALRD1Q5VYJ5 2156 aa18.04■□□□□ 0.48
SEC22C-207ENST00000423701 TRAV20A0A0B4J274 112 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 GABRPO00591 440 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 FCN3O75636 299 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 PSMB9P28065 219 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 NPBWR2P48146 333 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 GP2P55259 537 aaKnown RBP18.03■□□□□ 0.48
SEC22C-207ENST00000423701 TRAM1Q15629 374 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 WDR25Q64LD2 544 aaPredicted RBP18.03■□□□□ 0.48
SEC22C-207ENST00000423701 ZNF788Q6ZQV5 615 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 SLC36A1Q7Z2H8 476 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 CEACAM19Q7Z692 300 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 Q8IYB0 196 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 GAFA1Q96PS6 74 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 GPER1Q99527 375 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 DNTTIP1Q9H147 329 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 RBFOX1Q9NWB1 397 aaKnown RBP18.03■□□□□ 0.48
SEC22C-207ENST00000423701 NDUFB11Q9NX14 153 aa18.03■□□□□ 0.48
SEC22C-207ENST00000423701 NKX6-3A6NJ46 265 aa18.02■□□□□ 0.48
SEC22C-207ENST00000423701 TRAPPC2LH3BP13 241 aa18.02■□□□□ 0.48
SEC22C-207ENST00000423701 TMEM225BP0DP42 221 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms