RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 NKX3-1Q99801 234 aaPredicted RBP7.76□□□□□ -1.17
PDGFC-202ENST00000422544 SMR3AQ99954 134 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TMEM246Q9BRR3 403 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 PKIBQ9C010 78 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 ZNF665Q9H7R5 613 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TMEM138Q9NPI0 162 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 SNTG1Q9NSN8 517 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 MTCH1Q9NZJ7 389 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 PCDHB10Q9UN67 800 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 FOXJ3Q9UPW0 622 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 POLDIP2Q9Y2S7 368 aa7.76□□□□□ -1.17
PDGFC-202ENST00000422544 TRAV38-1A0A0B4J264 116 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 CEACAM18A8MTB9 384 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 F8VVB4 439 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 F8VWA3 439 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 GABRPO00591 440 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 TNFRSF13BO14836 293 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-202ENST00000422544 ANGPTL7O43827 346 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 NOS1APO75052 506 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-202ENST00000422544 SC5DO75845 299 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-202ENST00000422544 FSTL3O95633 263 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 IGHV2-5P01817 119 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 TFF1P04155 84 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 ALDOBP05062 364 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 WNT2P09544 360 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 TMEM225BP0DP42 221 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 FOSL1P15407 271 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 FSTP19883 344 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 BDKRB2P30411 391 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 NPBWR2P48146 333 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 MICBQ29980 383 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 HSD17B12Q53GQ0 312 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 DDI2Q5TDH0 399 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 FAM90A1Q86YD7 464 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 MKXQ8IYA7 352 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 MUC20Q8N307 709 aaPredicted RBP7.75□□□□□ -1.17
PDGFC-202ENST00000422544 SPICQ8N5J4 248 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 OR51F2Q8NH61 342 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 THRSPQ92748 146 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 MUL1Q969V5 352 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 TMIGD2Q96BF3 282 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 GPER1Q99527 375 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 NRIP2Q9BQI9 281 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 PATZ1Q9HBE1 687 aaKnown RBP7.75□□□□□ -1.17
PDGFC-202ENST00000422544 TCF7L1Q9HCS4 588 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 NDUFB11Q9NX14 153 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 RASL12Q9NYN1 266 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 DNAJB11Q9UBS4 358 aa7.75□□□□□ -1.17
PDGFC-202ENST00000422544 IGKV1-12A0A0C4DH73 117 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 TRIM64CA6NLI5 447 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 FAM157AC9JC47 383 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 NXPH2O95156 264 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 LY6G6DO95868 133 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 CYB5AP00167 134 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 IGKV1D-12P01611 117 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 HEXAP06865 529 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 ACAA1P09110 424 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-202ENST00000422544 UCHL1P09936 223 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 SMIM18P0DKX4 95 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 IGHV4-31P0DP07 118 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 CALCBP10092 127 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 MUC1P15941 1255 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-202ENST00000422544 SRMP19623 302 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 AMY2BP19961 511 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 BCL3P20749 454 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 ZNF93P35789 620 aaPredicted RBP7.74□□□□□ -1.17
PDGFC-202ENST00000422544 OR3A4PP47883 348 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 ZP1P60852 638 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 ERVK11-1P61568 191 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 SEC61A1P61619 476 aaKnown RBP7.74□□□□□ -1.17
PDGFC-202ENST00000422544 KCNJ8Q15842 424 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 ACP7Q6ZNF0 438 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 DCDC5Q6ZRR9 648 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 C1QL2Q7Z5L3 287 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 LRRTM1Q86UE6 522 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 TNFAIP8L1Q8WVP5 186 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 C12orf43Q96C57 262 aaKnown RBP7.74□□□□□ -1.17
PDGFC-202ENST00000422544 RAB39BQ96DA2 213 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 MSI2Q96DH6 328 aaKnown RBP7.74□□□□□ -1.17
PDGFC-202ENST00000422544 CEP19Q96LK0 163 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 CCL13Q99616 98 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 LPAR2Q9HBW0 351 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 VCX3AQ9NNX9 186 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 NLKQ9UBE8 527 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 MIOXQ9UGB7 285 aa7.74□□□□□ -1.17
PDGFC-202ENST00000422544 IGKV1D-17A0A075B6S4 117 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 A0A1B0GW55 424 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 TRDV1A0A1B0GX56 115 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 RFPL4AA6NLU0 287 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 OR2AT4A6NND4 320 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 F5H0A9 414 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-202ENST00000422544 RFPL4AL1F8VTS6 287 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 TRAPPC2LH3BP13 241 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 TMPRSS2O15393 492 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ADAM20O43506 726 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 NDUFA2O43678 99 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 ARL6IP5O75915 188 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 SFTPBP07988 381 aa7.73□□□□□ -1.17
PDGFC-202ENST00000422544 DUX4L2P0CJ85 424 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms