RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 SULT4A1Q9BR01 284 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 PDCD10Q9BUL8 212 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 LIME1Q9H400 295 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 PARPBPQ9NWS1 579 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 EMC3Q9P0I2 261 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 ROS1P08922 2347 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 PCNX1Q96RV3 2341 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 TRAV14DV4A0A0A6YYC5 116 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 OR5H14A6NHG9 310 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 ADAP1O75689 374 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 LYZL6O75951 148 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 ALX3O95076 343 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 GSTP1P09211 210 aaKnown RBP7.6□□□□□ -1.19
SNCA-206ENST00000420646 ZBTB25P24278 435 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 OR3A3P47888 321 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 OR3A2P47893 321 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 KRTAP27-1Q3LI81 207 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 CLVS2Q5SYC1 327 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 ALKAL2Q6UX46 152 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 OR5H2Q8NGV7 314 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 TERB2Q8NHR7 220 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 TMEM45BQ96B21 275 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 Q96M66 194 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 ARL6Q9H0F7 186 aa7.6□□□□□ -1.19
SNCA-206ENST00000420646 SLC22A20A6NK97 555 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 FIGNL2A6NMB9 653 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 H3BUI4 141 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 SELEP16581 610 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 ATP1B3P54709 279 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 SEC61A1P61619 476 aaKnown RBP7.59□□□□□ -1.19
SNCA-206ENST00000420646 AADACL3Q5VUY0 350 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 ALKBH2Q6NS38 261 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 RPUSD3Q6P087 351 aaKnown RBP7.59□□□□□ -1.19
SNCA-206ENST00000420646 SLC25A42Q86VD7 318 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 ZNF611Q8N823 705 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 OR10AD1Q8NGE0 317 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 TMEM230Q96A57 120 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 TRAF4Q9BUZ4 470 aaPredicted RBP7.59□□□□□ -1.19
SNCA-206ENST00000420646 BCO1Q9HAY6 547 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 AK3Q9UIJ7 227 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 ST3GAL6Q9Y274 331 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 CRYZL1O95825 349 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 CPT2P23786 658 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 AGTR1P30556 359 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 HAAOP46952 286 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 ERVS71-1P61550 626 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 PDZK1IP1Q13113 114 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 DAZAP2Q15038 168 aaPredicted RBP7.59□□□□□ -1.19
SNCA-206ENST00000420646 Q6ZPA2 131 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 HOGA1Q86XE5 327 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 CNEP1R1Q8N9A8 125 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 CCDC107Q8WV48 283 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 SLAMF9Q96A28 289 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 MARS2Q96GW9 593 aaKnown RBP7.59□□□□□ -1.19
SNCA-206ENST00000420646 C1QTNF5Q9BXJ0 243 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 METTL9Q9H1A3 318 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 RDH8Q9NYR8 311 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 KMT2EQ8IZD2 1858 aa7.59□□□□□ -1.19
SNCA-206ENST00000420646 LINC01387J3KSC0 135 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 OR7C1O76099 320 aaPredicted RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 UBBP0CG47 229 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 WNT5AP41221 380 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 CHRFAM7AQ494W8 412 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 Q6ZSR3 168 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 LYG2Q86SG7 212 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 GLRX5Q86SX6 157 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 ZSCAN4Q8NAM6 433 aaPredicted RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 PPP1R1CQ8WVI7 109 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 IP6K3Q96PC2 410 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 TRIB1Q96RU8 372 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 OCSTAMPQ9BR26 566 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 RTBDNQ9BSG5 229 aaPredicted RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 ALX4Q9H161 411 aaPredicted RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 CLEC4MQ9H2X3 399 aaPredicted RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 ACKR4Q9NPB9 350 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 INTS1Q8N201 2190 aaKnown RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 ESPL1Q14674 2120 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 NOTCH2Q04721 2471 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 CDK2AP1O14519 115 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 ALDH3B1P43353 468 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 OR8B8Q15620 311 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 TMEM42Q69YG0 159 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 OR2T2Q6IF00 324 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 C3P1Q6ZMU1 363 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 MDP1Q86V88 176 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 SPERTQ8NA61 448 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 GPHA2Q96T91 129 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 SLC2A8Q9NY64 477 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 KCNN3Q9UGI6 736 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 LRBAP50851 2863 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 ZNF816-ZNF321PA0A0X1KG74 233 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 C5orf51A6NDU8 294 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 K7EM74 188 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 SPDEFO95238 335 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 PGAM2P15259 253 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 NOVA1P51513 510 aaKnown RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 SUPT4H1P63272 117 aaKnown RBP7.58□□□□□ -1.2
SNCA-206ENST00000420646 GTF3C1Q12789 2109 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 PRDX4Q13162 271 aa7.58□□□□□ -1.2
SNCA-206ENST00000420646 CNN3Q15417 329 aaKnown RBP7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms