RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 MAB21L1Q13394 359 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 ARL6IP1Q15041 203 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 SWI5Q1ZZU3 235 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 LINC00596Q86U02 117 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR4M1Q8NGD0 313 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR51F2Q8NH61 342 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 TMEM59Q9BXS4 323 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 MS4A5Q9H3V2 200 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 TAAR3PQ9P1P4 343 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 MYEF2Q9P2K5 600 aaKnown RBP12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 POU2F3Q9UKI9 436 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 PLEKHA6Q9Y2H5 1048 aa12.11□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZSCAN5BA6NJL1 495 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 GSTZ1O43708 216 aaPredicted RBP12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 CA11O75493 328 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 HLA-DQB1P01920 261 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 CPT2P23786 658 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 PMELP40967 661 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 PTH2RP49190 550 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 SRP9P49458 86 aaKnown RBP12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZNF81P51508 661 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 EFNB2P52799 333 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 FGF12P61328 243 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 DCTN2Q13561 401 aaKnown RBP12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 RSU1Q15404 277 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 MST1LQ2TV78 715 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 PCGF3Q3KNV8 242 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 HACD4Q5VWC8 232 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 SLC25A26Q70HW3 274 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 WDR86Q86TI4 376 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 BIVMQ86UB2 503 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 C11orf53Q8IXP5 236 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 TMEM104Q8NE00 496 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR56B1Q8NGI3 324 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR10Z1Q8NGY1 313 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 Q8TCH9 128 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM46BQ96A09 425 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 MARVELD3Q96A59 401 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 Q96M66 194 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 SDHCQ99643 169 aaPredicted RBP12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 SYT3Q9BQG1 590 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 IFT22Q9H7X7 185 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 CISD1Q9NZ45 108 aaKnown RBP12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 MTCH1Q9NZJ7 389 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 FZR1Q9UM11 496 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 ING4Q9UNL4 249 aa12.1□□□□□ -0.47
SHMT1P1-201ENST00000419974 C17orf100A8MU93 164 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 H0YL77 283 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 C19orf84I3L1E1 186 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 SULT1C2O00338 296 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 CSTBP04080 98 aaKnown RBP12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 SFTPBP07988 381 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 PGA5P0DJD9 388 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 MGMTP16455 207 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 TNFSF4P23510 183 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 CDK2P24941 298 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 PLA2G7Q13093 441 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 ZNF181Q2M3W8 571 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 HAGHLQ6PII5 290 aaPredicted RBP12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 VHLLQ6RSH7 139 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 FAM131AQ6UXB0 335 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 OSR2Q8N2R0 312 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 SCCPDHQ8NBX0 429 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 OR5D18Q8NGL1 313 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 DEDD2Q8WXF8 326 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 RFT1Q96AA3 541 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 PIK3IP1Q96FE7 263 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 HS3ST6Q96QI5 342 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 ABHD1Q96SE0 405 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 GAL3ST1Q99999 423 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 NRIP2Q9BQI9 281 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 HES4Q9HCC6 221 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 MSL2Q9HCI7 577 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 RASL12Q9NYN1 266 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 HSF4Q9ULV5 492 aa12.09□□□□□ -0.47
SHMT1P1-201ENST00000419974 CREBBPQ92793 2442 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 LRBAP50851 2863 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 A6NNC1 897 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 TRAPPC2LH3BP13 241 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 IFNL4K9M1U5 179 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 M0R233 179 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 SPRY1O43609 319 aaPredicted RBP12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 CRTAPO75718 401 aaPredicted RBP12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 IGHV1-46P01743 117 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 GLAP06280 429 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 SNTB1Q13884 538 aaKnown RBP12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 IL13RA2Q14627 380 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 TESK1Q15569 626 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 NKPD1Q17RQ9 610 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 MPV17LQ2QL34 196 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 SLC22A6Q4U2R8 563 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 DMRTC1Q5HYR2 192 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 TMEM69Q5SWH9 247 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 FAM90A1Q86YD7 464 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 POC1AQ8NBT0 407 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 OR2Z1Q8NG97 314 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 OR10R2Q8NGX6 335 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 PHF21AQ96BD5 680 aa12.08□□□□□ -0.48
SHMT1P1-201ENST00000419974 ELMOD3Q96FG2 381 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms