RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 FIGLAQ6QHK4 219 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 MRPL52Q86TS9 123 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 LINC00346Q8IVM7 164 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 KIR2DL5AQ8N109 375 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 NPRL2Q8WTW4 380 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 DAZLQ92904 295 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 KLHDC3Q9BQ90 382 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 IL17BQ9UHF5 180 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM131Q92545 1883 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 XKRY2A2RUG3 117 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 CDC14CA4D256 554 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 METTL12A8MUP2 240 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 ETV2O00321 342 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 CRTAPO75718 401 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 MDKP21741 143 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 RPL23AP62750 156 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 THEM4Q5T1C6 240 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 C1orf194Q5T5A4 169 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 FAM90A2PQ658T7 463 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF573Q86YE8 665 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 OR5AS1Q8N127 324 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 FAM89BQ8N5H3 189 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 OR14L1PQ8NHC6 308 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 C16orf52Q8NHV5 167 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 HAS2Q92819 552 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 THOC3Q96J01 351 aaKnown RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 HIST1H2AAQ96QV6 131 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF2Q9BSG1 426 aaPredicted RBP7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 PADI1Q9ULC6 663 aa7.04□□□□□ -1.28
HMGXB4-202ENST00000418170 TRAV36DV7A0A075B6V5 113 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 TP53I11O14683 189 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 RRP8O43159 456 aaKnown RBP7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF43P17038 809 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 SFTPDP35247 375 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 OR3A1P47881 315 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ASCL1P50553 236 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM187Q14656 261 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF774Q6NX45 483 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 LILRA6Q6PI73 481 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 FBXW12Q6X9E4 464 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF283Q8N7M2 679 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 LRTM2Q8N967 370 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 OR52M1Q8NGK5 317 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 RNF133Q8WVZ7 376 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ACY3Q96HD9 319 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 WNT5BQ9H1J7 359 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 OR10A2Q9H208 303 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 CENPMQ9NSP4 180 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 FOXI3A8MTJ6 420 aaPredicted RBP7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 TGFBR3LH3BV60 316 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 EML2O95834 649 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 IGHMP01871 453 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 HPNP05981 417 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 FGF5P12034 268 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 DUSP1P28562 367 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 DRD3P35462 400 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 GPR3P46089 330 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZFP36L1Q07352 338 aaKnown RBP7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF880Q6PDB4 577 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 LYZL2Q7Z4W2 148 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 PBOV1Q9GZY1 135 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 LOC102723971A0A1B0GUV8 181 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 DHRS7CA6NNS2 312 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 PITX3O75364 302 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 MT-ATP6P00846 226 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 HBE1P02100 147 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 DBHP09172 617 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF20P17024 532 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 PIGPP57054 158 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 SP6Q3SY56 376 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 AGBL4Q5VU57 503 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 PLPP4Q5VZY2 271 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 FAM3CQ92520 227 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 TMEM18Q96B42 140 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 CTDSP1Q9GZU7 261 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 TBC1D29Q9UFV1 150 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 IGKV1D-8A0A087WSZ0 117 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 HIDE1A8MVS5 230 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF878C9JN71 531 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 SCDO00767 359 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 MMP7P09237 267 aaPredicted RBP7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 CCKARP32238 428 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 CSNK1A1P48729 337 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF784Q8NCA9 323 aaPredicted RBP7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 REEP6Q96HR9 211 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 C18orf12Q96KH6 178 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ZNF385AQ96PM9 386 aaKnown RBP7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 PYGO2Q9BRQ0 406 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 ANGPTL4Q9BY76 406 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 NAA60Q9H7X0 242 aa7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 MRPS23Q9Y3D9 190 aaKnown RBP7.03□□□□□ -1.28
HMGXB4-202ENST00000418170 CACNA1IQ9P0X4 2223 aa7.02□□□□□ -1.28
HMGXB4-202ENST00000418170 A6NNC1 897 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 SERPINE3A8MV23 424 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 HSPA12AO43301 675 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 DXOO77932 396 aaKnown RBP7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 CST2P09228 141 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 GNG10P50151 68 aa7.02□□□□□ -1.29
HMGXB4-202ENST00000418170 SGCGQ13326 291 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms