RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 TMEM89A2RUT3 159 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 ZNF878C9JN71 531 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 LOC110117498-PIK3R3F6TDL0 507 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 RAB3BP20337 219 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 MAPK3P27361 379 aaPredicted RBP17.11■□□□□ 0.33
PTPRU-203ENST00000415600 PITPNBP48739 271 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 GRB2P62993 217 aaKnown RBP17.11■□□□□ 0.33
PTPRU-203ENST00000415600 PPP3R1P63098 170 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 SPATC1Q76KD6 591 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 CATSPERDQ86XM0 798 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 ZNF676Q8N7Q3 588 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 C22orf15Q8WYQ4 148 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 THRSPQ92748 146 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 DVL3Q92997 716 aaPredicted RBP17.11■□□□□ 0.33
PTPRU-203ENST00000415600 KCNJ15Q99712 375 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 TMEM246Q9BRR3 403 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 ADAT1Q9BUB4 502 aaKnown RBP17.11■□□□□ 0.33
PTPRU-203ENST00000415600 MS4A7Q9GZW8 240 aaPredicted RBP17.11■□□□□ 0.33
PTPRU-203ENST00000415600 ABCB9Q9NP78 766 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 CENPMQ9NSP4 180 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 R4GMQ9 66 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 ARHGAP32A7KAX9 2087 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 IGHV3-64DA0A0J9YX35 117 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 PIN1P1O15428 100 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 XRCC2O43543 280 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 ZNF205O95201 554 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 CA6P23280 308 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 CFPP27918 469 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 OTX1P32242 354 aaPredicted RBP17.11■□□□□ 0.33
PTPRU-203ENST00000415600 DCTDP32321 178 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 DDOSTP39656 456 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 PAX8Q06710 450 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 SFXN4Q6P4A7 337 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 RHOUQ7L0Q8 258 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 NAA40Q86UY6 237 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 RAB40AQ8WXH6 277 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 SLAMF6Q96DU3 332 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 ZCCHC4Q9H5U6 513 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 NOX4Q9NPH5 578 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 C14orf119Q9NWQ9 140 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 RNF7Q9UBF6 113 aa17.11■□□□□ 0.33
PTPRU-203ENST00000415600 IGHV2-70DA0A0C4DH43 119 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 A0A1W2PPK0 400 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 ACOD1A6NK06 481 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 H2BFMP0C1H6 154 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 HSD11B1P28845 292 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 NPY4RP50391 375 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 UBA52P62987 128 aaKnown RBP17.1■□□□□ 0.33
PTPRU-203ENST00000415600 ZNF92Q03936 586 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 MFGE8Q08431 387 aaPredicted RBP17.1■□□□□ 0.33
PTPRU-203ENST00000415600 MAB21L1Q13394 359 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 DOK3Q7L591 496 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 GPR148Q8TDV2 347 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 UFSP2Q9NUQ7 469 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 COMMD3Q9UBI1 195 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 V9GYH0 126 aa17.1■□□□□ 0.33
PTPRU-203ENST00000415600 ANKRD61A6NGH8 418 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 NDUFA2O43678 99 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 UPK1BO75841 260 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 OCM2P0CE71 109 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 SRMP19623 302 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 OR10A3P58181 314 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 IFITM3Q01628 133 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 SNAI3Q3KNW1 292 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 IDNKQ5T6J7 187 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 CD276Q5ZPR3 534 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 SIGLECL1Q8N7X8 197 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 OR10S1Q8NGN2 331 aa17.09■□□□□ 0.33
PTPRU-203ENST00000415600 TRBV5-7A0A0A0MS05 114 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 ANKRD30BLA7E2S9 258 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 NOTOA8MTQ0 251 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 PRKXP51817 358 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 PRSS12P56730 875 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 FOXL1Q12952 345 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 CEP78Q5JTW2 689 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.08■□□□□ 0.32
PTPRU-203ENST00000415600 FTMTQ8N4E7 242 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 ZDHHC22Q8N966 263 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 ADAM30Q9UKF2 790 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 N6AMT1Q9Y5N5 214 aa17.08■□□□□ 0.32
PTPRU-203ENST00000415600 TRAV38-1A0A0B4J264 116 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 KIR2DS1A0A191URI9 304 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 A0A1B0GVG6 124 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 PDCD5O14737 125 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 ENSAO43768 121 aaKnown RBP17.07■□□□□ 0.32
PTPRU-203ENST00000415600 PRTN3P24158 256 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 CD80P33681 288 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 BAMBIQ13145 260 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 RGS21Q2M5E4 152 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 GLYATL3Q5SZD4 288 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 OR52H1Q8NGJ2 320 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 OR8S1Q8NH09 359 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 OR2AE1Q8NHA4 323 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 SLC25A28Q96A46 364 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 NUDT16L1Q9BRJ7 211 aaKnown RBP17.07■□□□□ 0.32
PTPRU-203ENST00000415600 CCDC32Q9BV29 185 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 NIPAL2Q9H841 368 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 ZNF69Q9UC07 566 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 SLC22A13Q9Y226 551 aa17.07■□□□□ 0.32
PTPRU-203ENST00000415600 A6NLC8 198 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms