RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 BCAT2O15382 392 aaPredicted RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 NME2P1O60361 137 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 SEC11BP0C7V7 166 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 ZNF806P0C7X5 589 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 DTYMKP23919 212 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 SFTPDP35247 375 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 SUCLG1P53597 346 aaKnown RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 UCP2P55851 309 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 RSPO1Q2MKA7 263 aaPredicted RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 EIF2S3LQ2VIR3 472 aaKnown RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 RNF212Q495C1 297 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 PLXDC2Q6UX71 529 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 GALNTL5Q7Z4T8 443 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 LRTM2Q8N967 370 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 SPTSSAQ969W0 71 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 NABP1Q96AH0 204 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 GALNT14Q96FL9 552 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 DEFB126Q9BYW3 111 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 METTL9Q9H1A3 318 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 WFDC1Q9HC57 220 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 NIT2Q9NQR4 276 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 FAM212BQ9NTI7 297 aaPredicted RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 ZNF701Q9NV72 531 aaPredicted RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 NECAP2Q9NVZ3 263 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 RARRES3Q9UL19 164 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 PADI1Q9ULC6 663 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 PIGLQ9Y2B2 252 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 MRPS17Q9Y2R5 130 aaKnown RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 TIMM10BQ9Y5J6 103 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 E5RGE8 158 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 F5H5K5 113 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 ARG1P05089 322 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 RD3LP0DJH9 198 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 ACKR3P25106 362 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 TMEM33P57088 247 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 FABP9Q0Z7S8 132 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 AWAT1Q58HT5 328 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 GPR157Q5UAW9 335 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 GGNBP1Q5YKI7 109 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 LCN10Q6JVE6 187 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 OR9K2Q8NGE7 335 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 SNIP1Q8TAD8 396 aaKnown RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 BCL2L14Q9BZR8 327 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 LIME1Q9H400 295 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 TUBA4BQ9H853 241 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 MCTS1Q9ULC4 181 aaKnown RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 NSG2Q9Y328 171 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 STARD10Q9Y365 291 aa8.55□□□□□ -1.04
CD44-206ENST00000415148 CHCHD2Q9Y6H1 151 aaPredicted RBP8.55□□□□□ -1.04
CD44-206ENST00000415148 UBE2CO00762 179 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 DHHO43323 396 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 TXNL1O43396 289 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 OR8U8P0C7N1 319 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 FAHP16930 419 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 SHBQ15464 509 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 ACER2Q5QJU3 275 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 ASCL4Q6XD76 172 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 C6orf201Q7Z4U5 140 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 MRPL24Q96A35 216 aaKnown RBP8.54□□□□□ -1.04
CD44-206ENST00000415148 SUCNR1Q9BXA5 334 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 ANGPTL4Q9BY76 406 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 MTCH2Q9Y6C9 303 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 C7orf77A4D0Y5 90 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 OR5H15A6NDH6 313 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 M0R135 149 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 TIAF1O95411 115 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 OR5H8P0DN80 308 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 GLI4P10075 376 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 MYF5P13349 255 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 NQO2P16083 231 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 RAB5CP51148 216 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 RAB5BP61020 215 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 KRBOX4Q5JUW0 171 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 FAM27BQ5VT28 67 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 CDPF1Q6NVV7 123 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 TMEM123Q8N131 208 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 SGK3Q96BR1 496 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 ZNF799Q96GE5 643 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 SH3BGRL3Q9H299 93 aa8.54□□□□□ -1.04
CD44-206ENST00000415148 SEBOXQ9HB31 216 aaPredicted RBP8.54□□□□□ -1.04
CD44-206ENST00000415148 ELL3Q9HB65 397 aaPredicted RBP8.54□□□□□ -1.04
CD44-206ENST00000415148 LSM5Q9Y4Y9 91 aaKnown RBP8.54□□□□□ -1.04
CD44-206ENST00000415148 A0A1W2PPE2 198 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 NPIPA2E9PIF3 369 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 NPIPA3F8WFD2 350 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 GPR137BO60478 399 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 CLN5O75503 358 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 DANCRP0C864 163 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 TMEM225BP0DP42 221 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 AGAP20933 346 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 GABRR1P24046 479 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 SNCAP37840 140 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 ASCL1P50553 236 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 UCP3P55916 312 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 MTCP1P56278 107 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 OR2B8PP59922 312 aa8.53□□□□□ -1.04
CD44-206ENST00000415148 MRPS34P82930 218 aaKnown RBP8.53□□□□□ -1.04
CD44-206ENST00000415148 TMEM187Q14656 261 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms