RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ARHGAP5-AS1Q96IT6 56 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 HES7Q9BYE0 225 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 RPS10P5Q9NQ39 176 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 C19orf12Q9NSK7 152 aa10.55□□□□□ -0.72
PTPRF-205ENST00000414879 MRPS18CQ9Y3D5 142 aaKnown RBP10.55□□□□□ -0.72
PTPRF-205ENST00000414879 IGLV3-12A0A075B6K2 115 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF239Q16600 458 aaKnown RBP10.54□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF468Q5VIY5 522 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-205ENST00000414879 C20orf196Q8IYI0 205 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 OR2G3Q8NGZ4 309 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 CMTM2Q8TAZ6 248 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FBLIM1Q8WUP2 373 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 RAB40CQ96S21 281 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 TMEM74BQ9NUR3 256 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 KLK11Q9UBX7 282 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 A0A0B4J203 849 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 A0A1B0GV50 99 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 UMAD1C9J7I0 102 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 KRBOX4Q5JUW0 171 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 CST9LP1Q5W188 147 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 OR52N4Q8NGI2 321 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 RPS4Y2Q8TD47 263 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM234AQ9H0X4 552 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 KPTNQ9Y664 436 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-205ENST00000414879 ANKRD20A5PA0PJZ0 165 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 BMI1P35226 326 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 ALKAL2Q6UX46 152 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 YIPF5Q969M3 257 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 NIPSNAP3BQ9BS92 247 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 RHOFQ9HBH0 211 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A10PA6NDY2 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A18PA6NE21 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A16PA6NEW6 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A20PA6NIJ5 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A7PA6NKC0 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A22PA8MWA6 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A12PA8MX19 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A5PA8MXJ8 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A23PA8MXZ1 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 GMDSO60547 372 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A15PP0C7V4 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A13PP0C7W8 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A14PP0C7W9 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A24PP0C7X0 464 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 NAT2P11245 290 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 COX5AP20674 150 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 GZMKP49863 264 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 LINC00303Q3SY05 128 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 ETFRF1Q6IPR1 90 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 SLC25A47Q6Q0C1 308 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 COMMD1Q8N668 190 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 C15orf54Q8N8G6 183 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 VSTM2AQ8TAG5 236 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 ACTR3CQ9C0K3 210 aaPredicted RBP10.54□□□□□ -0.72
PTPRF-205ENST00000414879 RNF7Q9UBF6 113 aa10.54□□□□□ -0.72
PTPRF-205ENST00000414879 AGPAT2O15120 278 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 OIP5O43482 229 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 FOXO1Q12778 655 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 HSD17B11Q8NBQ5 300 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 DUSP18Q8NEJ0 188 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 PLEKHB1Q9UF11 243 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-205ENST00000414879 FOXD3Q9UJU5 478 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-205ENST00000414879 LNP1A1A4G5 178 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 FAM90A27PA6NNH2 459 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 K7ESF4 209 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 SFT2D2O95562 160 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 CTSDP07339 412 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-205ENST00000414879 H2AFB1P0C5Y9 115 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 HLA-DOBP13765 273 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 TGFBR1P36897 503 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 IL13RA2Q14627 380 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 TMPRSS7Q7RTY8 843 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF808Q8N4W9 903 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF441Q8N8Z8 693 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 OR10V1Q8NGI7 309 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF251Q9BRH9 671 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 OCEL1Q9H607 264 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ZNF71Q9NQZ8 489 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-205ENST00000414879 OOEPA6NGQ2 149 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 NME2P1O60361 137 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ISG15P05161 165 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 NME2P22392 152 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ZXDCQ2QGD7 858 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ABHD3Q8WU67 409 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 RFPL4AA6NLU0 287 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 RFPL4AL1F8VTS6 287 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 GFRA3O60609 400 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 MPZL1O95297 269 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 RAB4BP61018 213 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 UBE2KP61086 200 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 ETFDHQ16134 617 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 SUMF1Q8NBK3 374 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 HGDQ93099 445 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 AKR1E2Q96JD6 320 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 BIN3Q9NQY0 253 aa10.53□□□□□ -0.72
PTPRF-205ENST00000414879 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.53□□□□□ -0.72
PTPRF-205ENST00000414879 PSENENQ9NZ42 101 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms