RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 NUP50Q9UKX7 468 aa12.22□□□□□ -0.45
CHD1-202ENST00000414220 ZNF281Q9Y2X9 895 aa12.22□□□□□ -0.45
CHD1-202ENST00000414220 PCDHGB5Q9Y5G0 923 aa12.22□□□□□ -0.45
CHD1-202ENST00000414220 A0A1W2PPH5 198 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 ZNF879B4DU55 563 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 PTGES3LE9PB15 166 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 SIGLEC5O15389 551 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 OGG1O15527 345 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 PLATP00750 562 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 KNG1P01042 644 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 AVPP01185 164 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 PSG2P11465 335 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 NDUFB7P17568 137 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 ADRA2CP18825 462 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 RAB3AP20336 220 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 MYF6P23409 242 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 PRDX2P32119 198 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 VHLP40337 213 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 POU3F4P49335 361 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 WNT4P56705 351 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 BPIFB3P59826 476 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 PPP3R1P63098 170 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 PAX2Q02962 417 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 BLMHQ13867 455 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 CALHM1Q8IU99 346 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 ZNF561Q8N587 486 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 PARP16Q8N5Y8 322 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 FAM216BQ8N7L0 139 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 OR51A4Q8NGJ6 313 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 OR13C9Q8NGT0 318 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 OR10AC1Q8NH08 325 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 H1FXQ92522 213 aaKnown RBP12.21□□□□□ -0.45
CHD1-202ENST00000414220 THRSPQ92748 146 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 NRIP2Q9BQI9 281 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 MND1Q9BWT6 205 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 SUCNR1Q9BXA5 334 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 ANKRD60Q9BZ19 345 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 Q9H521 79 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 OPN4Q9UHM6 478 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 RAB26Q9ULW5 256 aa12.21□□□□□ -0.45
CHD1-202ENST00000414220 NF1P21359 2839 aa12.21□□□□□ -0.46
CHD1-202ENST00000414220 ZFHX3Q15911 3703 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 RFPL4AA6NLU0 287 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 RFPL4AL1F8VTS6 287 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 SULT1B1O43704 296 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 TOX4O94842 621 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 CDK1P06493 297 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 SOX2P48431 317 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 CAV3P56539 151 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 YIF1BQ5BJH7 314 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 RNLSQ5VYX0 342 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 C1orf229Q6ZS94 237 aaPredicted RBP12.2□□□□□ -0.46
CHD1-202ENST00000414220 TMEM185AQ8NFB2 350 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 TBC1D15Q8TC07 691 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 TMEM158Q8WZ71 300 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 GHSRQ92847 366 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 EMG1Q92979 244 aaKnown RBP12.2□□□□□ -0.46
CHD1-202ENST00000414220 UPRTQ96BW1 309 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 SDSLQ96GA7 329 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 ZNF488Q96MN9 340 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 GAFA1Q96PS6 74 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 MS4A7Q9GZW8 240 aaPredicted RBP12.2□□□□□ -0.46
CHD1-202ENST00000414220 RHOFQ9HBH0 211 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 SMURF1Q9HCE7 757 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 CKLFQ9UBR5 152 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 OR14J1Q9UGF5 321 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 RPUSD1Q9UJJ7 312 aaKnown RBP12.2□□□□□ -0.46
CHD1-202ENST00000414220 BLOC1S6Q9UL45 172 aa12.2□□□□□ -0.46
CHD1-202ENST00000414220 TRBV23-1A0A0A0MS06 115 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 A0A1W2PQ09 198 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 C22orf46C9J442 243 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 CHRM2P08172 466 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 C21orf33P30042 268 aaPredicted RBP12.19□□□□□ -0.46
CHD1-202ENST00000414220 FGF12P61328 243 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 PDZK1IP1Q13113 114 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 PDCD1Q15116 288 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 GPR157Q5UAW9 335 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 NANOGP1Q8N7R0 232 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 ZSCAN4Q8NAM6 433 aaPredicted RBP12.19□□□□□ -0.46
CHD1-202ENST00000414220 PPP1R35Q8TAP8 253 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 TMEM106AQ96A25 262 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 SLAMF9Q96A28 289 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 GPER1Q99527 375 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 PCGF1Q9BSM1 259 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 DCTN5Q9BTE1 182 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 HES4Q9HCC6 221 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 FKBP14Q9NWM8 211 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 KPTNQ9Y664 436 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 ABCA2Q9BZC7 2435 aa12.19□□□□□ -0.46
CHD1-202ENST00000414220 IGKV1D-17A0A075B6S4 117 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 IGKV1-27A0A075B6S5 117 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 IGKV1-9A0A0C4DH69 117 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 INMTO95050 263 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 CD1AP06126 327 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 TMEM225BP0DP42 221 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 BMXP51813 675 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 ERVK11-1P61568 191 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 ARF6P62330 175 aa12.18□□□□□ -0.46
CHD1-202ENST00000414220 BDH1Q02338 343 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms