RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 NXT1Q9UKK6 140 aaKnown RBP13.04□□□□□ -0.32
TTC39A-208ENST00000413473 DEDDO75618 318 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 SCGB1D2O95969 90 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 KLK3P07288 261 aaPredicted RBP13.04□□□□□ -0.32
TTC39A-208ENST00000413473 CYC1P08574 325 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 PATE4P0C8F1 98 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 NFYBP25208 207 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 NTF4P34130 210 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 ID4P47928 161 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 SULT1A2P50226 295 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 SUCLG1P53597 346 aaKnown RBP13.04□□□□□ -0.32
TTC39A-208ENST00000413473 PIGPP57054 158 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 TMEM268Q5VZI3 342 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 CCDC54Q8NEL0 328 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 CLDN23Q96B33 292 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 SPSB1Q96BD6 273 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 CMSS1Q9BQ75 279 aaKnown RBP13.04□□□□□ -0.32
TTC39A-208ENST00000413473 TUBD1Q9UJT1 453 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 EDARQ9UNE0 448 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 HS3ST3B1Q9Y662 390 aa13.04□□□□□ -0.32
TTC39A-208ENST00000413473 KLF7O75840 302 aaPredicted RBP13.03□□□□□ -0.32
TTC39A-208ENST00000413473 LCATP04180 440 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 ZNF468Q5VIY5 522 aaPredicted RBP13.03□□□□□ -0.32
TTC39A-208ENST00000413473 RPS19BP1Q86WX3 136 aaKnown RBP13.03□□□□□ -0.32
TTC39A-208ENST00000413473 DYRK2Q92630 601 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 SULT4A1Q9BR01 284 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 ZNF700Q9H0M5 742 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 SYNGR3O43761 229 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 IL11RAQ14626 422 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 EXT1Q16394 746 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 BTNL8Q6UX41 500 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 CLEC9AQ6UXN8 241 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 RAB11FIP2Q7L804 512 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 CRLF2Q9HC73 371 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 SH2D2AQ9NP31 389 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 AMDHD2Q9Y303 409 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 ZNF175Q9Y473 711 aa13.03□□□□□ -0.32
TTC39A-208ENST00000413473 FAM221AA4D161 298 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 JTBO76095 146 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 FCGR3AP08637 254 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 SFTA3P0C7M3 94 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 CD80P33681 288 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 RAB35Q15286 201 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 DHRS11Q6UWP2 260 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 OR1F12Q8NHA8 337 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 AKR7LQ8NHP1 331 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 IFI44Q8TCB0 444 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 NAT6Q93015 286 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 NECAP2Q9NVZ3 263 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 HSF4Q9ULV5 492 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 KCNIP3Q9Y2W7 256 aa13.02□□□□□ -0.32
TTC39A-208ENST00000413473 TRIOBPQ9H2D6 2365 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 CCDC187A0A096LP49 1063 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 C9JQL5 133 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 CBR3O75828 277 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 ZNF728P0DKX0 622 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 GLI4P10075 376 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 CCL4P13236 92 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 RBP2P50120 134 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 FXYD4P59646 89 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 BORCS8Q96FH0 119 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 PARP12Q9H0J9 701 aaKnown RBP13.02□□□□□ -0.33
TTC39A-208ENST00000413473 ZFP57Q9NU63 452 aa13.02□□□□□ -0.33
TTC39A-208ENST00000413473 GEMIN2O14893 280 aaKnown RBP13.01□□□□□ -0.33
TTC39A-208ENST00000413473 GAPDHP04406 335 aaKnown RBP13.01□□□□□ -0.33
TTC39A-208ENST00000413473 CD5P06127 495 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 TSPO2Q5TGU0 170 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 Q6ZRG5 221 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 YRDCQ86U90 279 aaKnown RBP13.01□□□□□ -0.33
TTC39A-208ENST00000413473 M1APQ8TC57 530 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 RTN4IP1Q8WWV3 396 aaPredicted RBP13.01□□□□□ -0.33
TTC39A-208ENST00000413473 ERGIC1Q969X5 290 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 MARS2Q96GW9 593 aaKnown RBP13.01□□□□□ -0.33
TTC39A-208ENST00000413473 PARP11Q9NR21 331 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 PCP4L1A6NKN8 68 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 OR5AC1P0C628 307 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 B4GALT1P15291 398 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 ZNF32P17041 273 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 CHATP28329 748 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 RAC3P60763 192 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 PDZK1IP1Q13113 114 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 CNN3Q15417 329 aaKnown RBP13.01□□□□□ -0.33
TTC39A-208ENST00000413473 ABCA11PQ4W5N1 156 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 GPR137CQ8N3F9 429 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 KIAA1549Q9HCM3 1950 aa13.01□□□□□ -0.33
TTC39A-208ENST00000413473 IGKV1-12A0A0C4DH73 117 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 IGKV1D-12P01611 117 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 MBPP02686 304 aaPredicted RBP13□□□□□ -0.33
TTC39A-208ENST00000413473 DTYMKP23919 212 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 TMEM187Q14656 261 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 FAM76BQ5HYJ3 339 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 LYZL2Q7Z4W2 148 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 OR10AD1Q8NGE0 317 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 SLC39A7Q92504 469 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 NTNG2Q96CW9 530 aa13□□□□□ -0.33
TTC39A-208ENST00000413473 BSCL2Q96G97 398 aaPredicted RBP13□□□□□ -0.33
TTC39A-208ENST00000413473 ALKBH3Q96Q83 286 aaPredicted RBP13□□□□□ -0.33
TTC39A-208ENST00000413473 SF3B5Q9BWJ5 86 aaKnown RBP13□□□□□ -0.33
TTC39A-208ENST00000413473 NAA60Q9H7X0 242 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms