RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 KCNJ16Q9NPI9 418 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 TMEM106BQ9NUM4 274 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 CCDC88CQ9P219 2028 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 IGHV2-26A0A0B4J1V2 119 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 CDC14CA4D256 554 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 GAPDHSO14556 408 aaPredicted RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 HS3ST1O14792 307 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 PRICKLE3O43900 615 aaPredicted RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 CELP19835 753 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 MAOAP21397 527 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 TSPOP30536 169 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 PTGER1P34995 402 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 FASLGP48023 281 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 DUSP2Q05923 314 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 RAB32Q13637 225 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 AMZ1Q400G9 498 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 NRN1LQ496H8 165 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 ACSM3Q53FZ2 586 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 Q6ZRG5 221 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 Q6ZWC4 215 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 COX15Q7KZN9 410 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 Q7L0L9 218 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 LGI3Q8N145 548 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 RNF175Q8N4F7 328 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 MORN4Q8NDC4 146 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 DCBLD2Q96PD2 775 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 MS4A10Q96PG2 267 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 GPR21Q99679 349 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 C19orf24Q9BVV8 132 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 SMG9Q9H0W8 520 aaKnown RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 SRD5A3Q9H8P0 318 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 ISG20L2Q9H9L3 353 aaKnown RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 TBC1D17Q9HA65 648 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 TRIM36Q9NQ86 728 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 CRIM1Q9NZV1 1036 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 MTFP1Q9UDX5 166 aa4.59□□□□□ -1.67
HERC4-205ENST00000412272 NUP210Q8TEM1 1887 aaPredicted RBP4.59□□□□□ -1.67
HERC4-205ENST00000412272 GAGE12HA6NDE8 117 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 ARL5CA6NH57 179 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 IFITM5A6NNB3 132 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 J3QR06 171 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 TAAR5O14804 337 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 FFAR2O15552 330 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 GDF9O60383 454 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 CD33P20138 364 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 PYCR1P32322 319 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 GNG3P63215 75 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 PSG9Q00887 426 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 SGCBQ16585 318 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 CD300EQ496F6 205 aaPredicted RBP4.59□□□□□ -1.68
HERC4-205ENST00000412272 H1FNTQ75WM6 255 aaPredicted RBP4.59□□□□□ -1.68
HERC4-205ENST00000412272 BCDIN3DQ7Z5W3 292 aaKnown RBP4.59□□□□□ -1.68
HERC4-205ENST00000412272 SPNS2Q8IVW8 549 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 TMEM192Q8IY95 271 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 INO80EQ8NBZ0 244 aaPredicted RBP4.59□□□□□ -1.68
HERC4-205ENST00000412272 OR6T1Q8NGN1 323 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 OR10S1Q8NGN2 331 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 NFKBIDQ8NI38 313 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 NRGNQ92686 78 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 RERGQ96A58 199 aaPredicted RBP4.59□□□□□ -1.68
HERC4-205ENST00000412272 MS4A6EQ96DS6 147 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 ZNF681Q96N22 645 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 UHRF2Q96PU4 802 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 DERL1Q9BUN8 251 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 NMES1Q9C002 83 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 NPVFQ9HCQ7 196 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 KLK11Q9UBX7 282 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 NXT1Q9UKK6 140 aaKnown RBP4.59□□□□□ -1.68
HERC4-205ENST00000412272 RARRES3Q9UL19 164 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 WIPI2Q9Y4P8 454 aa4.59□□□□□ -1.68
HERC4-205ENST00000412272 OR4C45A6NMZ5 311 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 B5MCH6 92 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 RCBTB2O95199 551 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 SERPINA4P29622 427 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 NTSR1P30989 418 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 PPICP45877 212 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 PIGPP57054 158 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 ERVK11-1P61568 191 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 LRRC37A5PQ49AS3 106 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 NOXRED1Q6NXP6 359 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 BHLHA9Q7RTU4 235 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CFAP52Q8N1V2 620 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 RYBPQ8N488 228 aaPredicted RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 PNPLA1Q8N8W4 532 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 Q8N976 141 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 OR4F17Q8NGA8 305 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 OR4B1Q8NGF8 309 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 OR5K2Q8NHB8 316 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 PPCDCQ96CD2 204 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 RCHY1Q96PM5 261 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 AQP10Q96PS8 301 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 OR4F4Q96R69 305 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 KCNK17Q96T54 332 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 ORAI3Q9BRQ5 295 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 RTBDNQ9BSG5 229 aaPredicted RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 PSMG3Q9BT73 122 aaPredicted RBP4.58□□□□□ -1.68
HERC4-205ENST00000412272 CFHR5Q9BXR6 569 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 VN1R1Q9GZP7 353 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 CHST6Q9GZX3 395 aa4.58□□□□□ -1.68
HERC4-205ENST00000412272 COA1Q9GZY4 146 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms