RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.39□□□□□ -0.43
ATRIP-204ENST00000412052 ZFP57Q9NU63 452 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 ANXA10Q9UJ72 324 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 IGKV1-12A0A0C4DH73 117 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 A0A0U1RQV5 110 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 ZNF850A8MQ14 1090 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 FAM157AC9JC47 383 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
ATRIP-204ENST00000412052 ZIC3O60481 467 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 IGKV1D-12P01611 117 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 MBPP02686 304 aaPredicted RBP12.39□□□□□ -0.43
ATRIP-204ENST00000412052 DAOP14920 347 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 SGPP2Q8IWX5 399 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 SLC25A43Q8WUT9 341 aaPredicted RBP12.39□□□□□ -0.43
ATRIP-204ENST00000412052 TMEM54Q969K7 222 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 C12orf57Q99622 126 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 SH3BGRL3Q9H299 93 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 DNAJB11Q9UBS4 358 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 NCKAP5O14513 1909 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 DOCK7Q96N67 2140 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 CRYM-AS1A6NIL9 109 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 PET100P0DJ07 73 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 SPINK2P20155 84 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 CTSSP25774 331 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 OTX1P32242 354 aaPredicted RBP12.39□□□□□ -0.43
ATRIP-204ENST00000412052 ALDH3B1P43353 468 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 SULT1A2P50226 295 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 ZNF84P51523 738 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 PLXDC2Q6UX71 529 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 CLCC1Q96S66 551 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 GPHA2Q96T91 129 aa12.39□□□□□ -0.43
ATRIP-204ENST00000412052 B4GALT1P15291 398 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 RSU1Q15404 277 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 C10orf128Q5T292 105 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 MRPL14Q6P1L8 145 aaKnown RBP12.38□□□□□ -0.43
ATRIP-204ENST00000412052 OR52M1Q8NGK5 317 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 FGFBP3Q8TAT2 258 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 GLYATL2Q8WU03 294 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 PP6455Q8WZ26 134 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 ZDHHC8Q9ULC8 765 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 AHCTF1Q8WYP5 2266 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 PRRC2CQ9Y520 2896 aaKnown RBP12.38□□□□□ -0.43
ATRIP-204ENST00000412052 CCDC187A0A096LP49 1063 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 CD5P06127 495 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 UMODP07911 640 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 CBR1P16152 277 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 EIF1P41567 113 aaKnown RBP12.38□□□□□ -0.43
ATRIP-204ENST00000412052 ZNF616Q08AN1 781 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 ISOC2Q96AB3 205 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 SAT2Q96F10 170 aaPredicted RBP12.38□□□□□ -0.43
ATRIP-204ENST00000412052 KIRREL1Q96J84 757 aa12.38□□□□□ -0.43
ATRIP-204ENST00000412052 COLCA2A8K830 154 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 CST4P01036 141 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 CTSDP07339 412 aaPredicted RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 MIDNQ504T8 468 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 YRDCQ86U90 279 aaKnown RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 TMEM156Q8N614 296 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 CRLF2Q9HC73 371 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 FOXD3Q9UJU5 478 aaPredicted RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 RCL1Q9Y2P8 373 aaKnown RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 MEMO1Q9Y316 297 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 SLC33A1O00400 549 aaPredicted RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 LCATP04180 440 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 LIFP15018 202 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 EPHA8P29322 1005 aaPredicted RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 ZNF239Q16600 458 aaKnown RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 SLC22A25Q6T423 547 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 RTN4IP1Q8WWV3 396 aaPredicted RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 C14orf79Q96F83 325 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 PCED1AQ9H1Q7 454 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 GHRLQ9UBU3 117 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 DKKL1Q9UK85 242 aa12.37□□□□□ -0.43
ATRIP-204ENST00000412052 PTRH2Q9Y3E5 179 aaKnown RBP12.37□□□□□ -0.43
ATRIP-204ENST00000412052 TP53I11O14683 189 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 F10P00742 488 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 IGHV3-9P01782 118 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 CCL4P13236 92 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 NHLH2Q02577 135 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 AVPI1Q5T686 147 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 FBXL14Q8N1E6 418 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 OR10AD1Q8NGE0 317 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 IP6K3Q96PC2 410 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 COA4Q9NYJ1 87 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 TUBD1Q9UJT1 453 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 KIAA1549Q9HCM3 1950 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 LOC102725191A0A1B0GVB3 256 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 C3orf80F5H4A9 247 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 LINC01387J3KSC0 135 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 SGCEO43556 437 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 ADH6P28332 368 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 HIST1H3AP68431 136 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 PEA15Q15121 130 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 SURF2Q15527 256 aaPredicted RBP12.36□□□□□ -0.43
ATRIP-204ENST00000412052 FAM76BQ5HYJ3 339 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 HIST2H3PS2Q5TEC6 136 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 HIST2H3AQ71DI3 136 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 MAML2Q8IZL2 1156 aaPredicted RBP12.36□□□□□ -0.43
ATRIP-204ENST00000412052 HSD17B11Q8NBQ5 300 aa12.36□□□□□ -0.43
ATRIP-204ENST00000412052 NAA11Q9BSU3 229 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms