RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 TBX1O43435 398 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 MTRF1O75570 445 aaKnown RBP4.89□□□□□ -1.63
LINC00396-201ENST00000411690 TK1P04183 234 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 FAM106CPP0CH98 169 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 HOXB9P17482 250 aaPredicted RBP4.89□□□□□ -1.63
LINC00396-201ENST00000411690 GPX2P18283 190 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 CRABP1P29762 137 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 PRDX2P32119 198 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 SLC18A1P54219 525 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 RIPK1Q13546 671 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 KRR1Q13601 381 aaKnown RBP4.89□□□□□ -1.63
LINC00396-201ENST00000411690 SLC36A3Q495N2 470 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 AGKQ53H12 422 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 FAM76BQ5HYJ3 339 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 LRIF1Q5T3J3 769 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 ASPHD1Q5U4P2 390 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 ACSM6Q6P461 480 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 DNM1P34Q6PK57 102 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 SLC16A9Q7RTY1 509 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 MSRB3Q8IXL7 192 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 C5orf56Q8N8D9 126 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 RNF152Q8N8N0 203 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 C11orf65Q8NCR3 313 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 CCDC197Q8NCU1 140 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 OR9I1Q8NGQ6 314 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 OR13C2Q8NGS9 318 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 ZNF671Q8TAW3 534 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 SPSB4Q96A44 273 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 RNF170Q96K19 258 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 ZNF714Q96N38 554 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 C8orf49Q96NF6 230 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 TSSK2Q96PF2 358 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 TMED9Q9BVK6 235 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 POLR2J2Q9GZM3 115 aaKnown RBP4.89□□□□□ -1.63
LINC00396-201ENST00000411690 POLR2J3Q9H1A7 115 aaKnown RBP4.89□□□□□ -1.63
LINC00396-201ENST00000411690 TMEM133Q9H2Q1 129 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 KRCC1Q9NPI7 259 aaPredicted RBP4.89□□□□□ -1.63
LINC00396-201ENST00000411690 CCDC167Q9P0B6 97 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 VAPAQ9P0L0 249 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 KLK5Q9Y337 293 aaPredicted RBP4.89□□□□□ -1.63
LINC00396-201ENST00000411690 SH3GLB1Q9Y371 365 aa4.89□□□□□ -1.63
LINC00396-201ENST00000411690 A0A1B0GVY2 172 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 OR6C68A6NDL8 312 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 LINC01548A6NM66 108 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 DCTN6O00399 190 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SOCS2O14508 198 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 HSPA12AO43301 675 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 FGF16O43320 207 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SNNO75324 88 aaPredicted RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 HLA-DQA2P01906 255 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 TROVE2P10155 538 aaKnown RBP eCLIP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SLC2A1P11166 492 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 OTX1P32242 354 aaPredicted RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 DCTDP32321 178 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 IFNA8P32881 189 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 MNDAP41218 407 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 OR1E2P47887 323 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 PRKXP51817 358 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 GTF2A1P52655 376 aaPredicted RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 EDDM3BP56851 147 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 ISL1P61371 349 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SNCBQ16143 134 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 TIGD6Q17RP2 521 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 GPR139Q6DWJ6 353 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 CEMP1Q6PRD7 247 aaPredicted RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SMARCD3Q6STE5 483 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 LINC00336Q6ZUF6 198 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 PTCHD4Q6ZW05 846 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 PATL1Q86TB9 770 aaKnown RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 ADCK1Q86TW2 530 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 THNSL2Q86YJ6 484 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 FTMTQ8N4E7 242 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 CSNK2A3Q8NEV1 391 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 ZNF596Q8TC21 504 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 RASSF5Q8WWW0 418 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 OR5P3Q8WZ94 311 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 DLX4Q92988 240 aaPredicted RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SPDL1Q96EA4 605 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 REEP6Q96HR9 211 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 OR4C12Q96R67 309 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 OR52B2Q96RD2 323 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 NDEL1Q9GZM8 345 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 IKZF5Q9H5V7 419 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SDR39U1Q9NRG7 319 aaPredicted RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 INTS9Q9NV88 658 aaKnown RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 CHCHD3Q9NX63 227 aaKnown RBP4.88□□□□□ -1.63
LINC00396-201ENST00000411690 RASL12Q9NYN1 266 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 DNAJB9Q9UBS3 223 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 CYB5R1Q9UHQ9 305 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 B9D1Q9UPM9 204 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 MPC1Q9Y5U8 109 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 GMEB1Q9Y692 573 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 SESN1Q9Y6P5 492 aa4.88□□□□□ -1.63
LINC00396-201ENST00000411690 KIAA2026Q5HYC2 2103 aa4.87□□□□□ -1.63
LINC00396-201ENST00000411690 ARRDC5A6NEK1 342 aa4.87□□□□□ -1.63
LINC00396-201ENST00000411690 ZNF850A8MQ14 1090 aa4.87□□□□□ -1.63
LINC00396-201ENST00000411690 I3L521 148 aa4.87□□□□□ -1.63
LINC00396-201ENST00000411690 PSMD9O00233 223 aa4.87□□□□□ -1.63
LINC00396-201ENST00000411690 ATP5HO75947 161 aa4.87□□□□□ -1.63
LINC00396-201ENST00000411690 SERPINA1P01009 418 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms