RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 FAM90A18PA6NE21 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ARRDC5A6NEK1 342 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A16PA6NEW6 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A20PA6NIJ5 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 TRIM64CA6NLI5 447 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A9PA6NNJ1 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 NCBP2LA6PVI3 153 aaKnown RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A12PA8MX19 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A5PA8MXJ8 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 A8MZ25 164 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OOSP1A8MZH6 123 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM220BPB1ANY3 271 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 BUB1B-PAK6H3BSN5 160 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 J3QT63 122 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 AP4M1O00189 453 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF593O00488 134 aaPredicted RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 TOR1AO14656 332 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 GSC2O15499 205 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FGF16O43320 207 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 RRP9O43818 475 aaKnown RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 NOS1APO75052 506 aaPredicted RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF737O75373 536 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SAP30O75446 220 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF682O95780 498 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 LY6G6CO95867 125 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 NPPAP01160 153 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGLV1-47P01700 117 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGHG2P01859 326 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 RPLP1P05386 114 aaKnown RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 H2BFMP0C1H6 154 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8U8P0C7N1 319 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A15PP0C7V4 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A13PP0C7W8 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A14PP0C7W9 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM90A24PP0C7X0 464 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 IGHV4-30-4P0DP06 118 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ATP6V1B1P15313 513 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SPNP16150 400 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 TMEM11P17152 192 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 RHCEP18577 417 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ACKR3P25106 362 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 IFNGR2P38484 337 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 MAP2K3P46734 347 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 HAAOP46952 286 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 POU3F4P49335 361 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 BLVRAP53004 296 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 PRRX1P54821 245 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF121P58317 390 aaPredicted RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SMIM11AP58511 58 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ESRRGP62508 458 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 VSNL1P62760 191 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 GABPB1Q06547 395 aaPredicted RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF616Q08AN1 781 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FOXE3Q13461 319 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 GPR50Q13585 617 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FHL3Q13643 280 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 HES1Q14469 280 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 EDDM3AQ14507 147 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 HNF4GQ14541 408 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SRSF7Q16629 238 aaKnown RBP eCLIP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 HLA-DRB5Q30154 266 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 DEFB136Q30KP8 78 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 KLHL12Q53G59 568 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 CEP78Q5JTW2 689 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 TEX30Q5JUR7 227 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLC35F1Q5T1Q4 408 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 TPTE2P1Q5T6R2 138 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 LCN1P1Q5VSP4 162 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SLX4IPQ5VYV7 408 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 RPL13AP3Q6NVV1 102 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 LYPD4Q6UWN0 246 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 C16orf89Q6UX73 402 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 MOB3CQ70IA8 216 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 CBLL1Q75N03 491 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SHFQ7M4L6 423 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 KRT74Q7RTS7 529 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 VTCN1Q7Z7D3 282 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 TRAPPC6BQ86SZ2 158 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 LYPD6Q86Y78 171 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF573Q86YE8 665 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 EGFL6Q8IUX8 553 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 SGPP2Q8IWX5 399 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR8H2Q8N162 312 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 STPG2Q8N412 459 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 LINC00471Q8N535 108 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 FAM71E2Q8N5Q1 922 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 C5orf56Q8N8D9 126 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 RNF152Q8N8N0 203 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 ZNF511Q8NB15 262 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR2T12Q8NG77 320 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR11H1Q8NG94 326 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR52L1Q8NGH7 329 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR51L1Q8NGJ5 315 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR6Q1Q8NGQ2 317 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR1N2Q8NGR9 330 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR6K6Q8NGW6 343 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR52J3Q8NH60 311 aa1.85□□□□□ -2.11
RNU4-53P-201ENST00000410828 OR56B4Q8NH76 319 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms