RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 SPI1P17947 270 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 KCNMB1Q16558 191 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 SLC25A30Q5SVS4 291 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 NRARPQ7Z6K4 114 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 C5orf17Q8NAS9 161 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 OR52I2Q8NH67 350 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 FLYWCH2Q96CP2 140 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 GNPNAT1Q96EK6 184 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 CCL19Q99731 98 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 TNRC6CQ9HCJ0 1690 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 PSME4Q14997 1843 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 IGKV3OR2-268A0A0C4DH90 116 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 A0A1W2PPQ1 181 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 TRABD2BA6NFA1 517 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 TOX3O15405 576 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 TMPRSS11DO60235 418 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 CTSLP07711 333 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 UBE2MP61081 183 aaKnown RBP10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 SAXO2Q658L1 398 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 LRRC29Q8WV35 223 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 TRAPPC1Q9Y5R8 145 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 BCORQ6W2J9 1755 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 CCR2P41597 374 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 C19orf57Q0VDD7 668 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 IGFBP7Q16270 282 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 LURAP1Q96LR2 239 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 CDX2Q99626 313 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 VSIG4Q9Y279 399 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 LAMB2P55268 1798 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 MGMTP16455 207 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 DUSP8Q13202 625 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 COMMD1Q8N668 190 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 C4orf45Q96LM5 186 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 ASCL3Q9NQ33 180 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 TMEM140Q9NV12 185 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 TSC2P49815 1807 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 A0A1W2PNV4 684 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 hADV38S2A0JD32 116 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 ARNTP27540 789 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 PTGFRP43088 359 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 KIR2DS2P43631 304 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 DHODHQ02127 395 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 OR2F1Q13607 317 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 OR10D3Q8NH80 312 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 MRGPRDQ8TDS7 321 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 NUDCD2Q8WVJ2 157 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 PACRGQ96M98 296 aaPredicted RBP10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 OCIAD1Q9NX40 245 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 CES1P1Q9UKY3 287 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 CST7O76096 145 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 ZNF154Q13106 437 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 OR52N1Q8NH53 320 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 MARCH1Q8TCQ1 289 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 CT55Q8WUE5 264 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 INSIG2Q9Y5U4 225 aa10.06□□□□□ -0.8
PRPF40A-202ENST00000410080 A0A1B0GTQ1 180 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 CGB1A6NKQ9 187 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 HNRNPA3P51991 378 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 SCGB1D4Q6XE38 83 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 TMEM116Q8NCL8 245 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 TEAD3Q99594 435 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 RPL12P30050 165 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 PPP1CCP36873 323 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 KTI12Q96EK9 354 aaPredicted RBP10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 MYEOVQ96EZ4 313 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 FOXB1Q99853 325 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 SYT11Q9BT88 431 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 PNPP00491 289 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 MMP11P24347 488 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 CCR9P51686 369 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 SNRPNP63162 240 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 C1QTNF3Q9BXJ4 246 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 TMEM38AQ9H6F2 299 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 M0R3E3 92 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 FZD6O60353 706 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 LIMK1P53667 647 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 AQP6Q13520 282 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 ZNF841Q6ZN19 808 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 NAA50Q9GZZ1 169 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 IGHV3-21A0A0B4J1V1 117 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 TNFSF14O43557 240 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 FABP4P15090 132 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 Q6ZN92 141 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 DOLPP1Q86YN1 238 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 THBS4P35443 961 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 POLR2IP36954 125 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 PPICP45877 212 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 SEZ6L2Q6UXD5 910 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 WDR13Q9H1Z4 485 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 PSORS1C1Q9UIG5 152 aa10.05□□□□□ -0.8
PRPF40A-202ENST00000410080 PDPNQ86YL7 162 aa10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 P2RX4Q99571 388 aa10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 JAM3Q9BX67 310 aa10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 NKX6-2Q9C056 277 aaPredicted RBP10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 ISG20L2Q9H9L3 353 aaKnown RBP10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 SLC22A13Q9Y226 551 aa10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 MTCH2Q9Y6C9 303 aa10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 SPTBN1Q01082 2364 aaKnown RBP10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 TRPM7Q96QT4 1865 aa10.04□□□□□ -0.8
PRPF40A-202ENST00000410080 S100A8P05109 93 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms