RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PRRG3Q9BZD7 231 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 NDEL1Q9GZM8 345 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 DUSP21Q9H596 190 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 TIGARQ9NQ88 270 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 ASF1BQ9NVP2 202 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 PAK1IP1Q9NWT1 392 aaPredicted RBP3.43□□□□□ -1.86
CLK1-203ENST00000409769 IMPAD1Q9NX62 359 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 CHCHD3Q9NX63 227 aaKnown RBP3.43□□□□□ -1.86
CLK1-203ENST00000409769 MED29Q9NX70 200 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 PSORS1C1Q9UIG5 152 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 MCTS1Q9ULC4 181 aaKnown RBP3.43□□□□□ -1.86
CLK1-203ENST00000409769 ZNF835Q9Y2P0 537 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 ZNF175Q9Y473 711 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 FLVCR1Q9Y5Y0 555 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 FKBP7Q9Y680 259 aa3.43□□□□□ -1.86
CLK1-203ENST00000409769 DIDO1Q9BTC0 2240 aaKnown RBP3.43□□□□□ -1.86
CLK1-203ENST00000409769 AGRNO00468 2067 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 IGLV1-36A0A0B4J1U3 117 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 hCG_38984A0A1B0GV85 526 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 A0A1W2PRG6 482 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 A6NIZ1 184 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RIIAD1A6NNX1 92 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 NPIPA2E9PIF3 369 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 H7C1C5 153 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 MRPS14O60783 128 aaKnown RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 SS18L1O75177 396 aaPredicted RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 GLCEO94923 617 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 TNFAIP8O95379 198 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 LYNP07948 512 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 DBTP11182 482 aaKnown RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 CTLA4P16410 223 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 ZNF43P17038 809 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 SPI1P17947 270 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 GATA2P23769 480 aaPredicted RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 ACVR1BP36896 505 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 BIDP55957 195 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RAP1BP61224 184 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 LCN6P62502 163 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RAP1AP62834 184 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 PPA1Q15181 289 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 STK11Q15831 433 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 ACSF3Q4G176 576 aaPredicted RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 TCTEX1D4Q5JR98 221 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RBM48Q5RL73 367 aaKnown RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 PHYHD1Q5SRE7 291 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 C10orf128Q5T292 105 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RNLSQ5VYX0 342 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 LEG1Q6P5S2 330 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 DHRS11Q6UWP2 260 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 HDDC2Q7Z4H3 204 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 GID4Q8IVV7 300 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 TUSC5Q8IXB3 177 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 ZNF786Q8N393 782 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 OR9Q1Q8NGQ5 310 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 FNDC9Q8TBE3 224 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 SETD6Q8TBK2 473 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 FAM57AQ8TBR7 257 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 FNDC8Q8TC99 324 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 NPRL2Q8WTW4 380 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RASL10AQ92737 203 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 MCHR2Q969V1 340 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 C11orf52Q96A22 123 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 SLC25A44Q96H78 314 aaPredicted RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 Q96MT0 163 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 TSSK2Q96PF2 358 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 OR2M2Q96R28 347 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 TEAD3Q99594 435 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 ALKBH7Q9BT30 221 aaPredicted RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 EMC6Q9BV81 110 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RACGAP1Q9H0H5 632 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 SYT4Q9H2B2 425 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 EXO5Q9H790 373 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 MARCH7Q9H992 704 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 CALHM2Q9HA72 323 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 ADGRL4Q9HBW9 690 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 FGF20Q9NP95 211 aaPredicted RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 RPRD1BQ9NQG5 326 aaKnown RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 CLN6Q9NWW5 311 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 CNOT2Q9NZN8 540 aaKnown RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 DNAJC27Q9NZQ0 273 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 WARS2Q9UGM6 360 aaKnown RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.42□□□□□ -1.86
CLK1-203ENST00000409769 TP53TG3Q9ULZ0 132 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 B9D1Q9UPM9 204 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 RPL36Q9Y3U8 105 aaKnown RBP3.42□□□□□ -1.86
CLK1-203ENST00000409769 FAM215AQ9Y5M1 114 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 BOD1L1Q8NFC6 3051 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 ZZEF1O43149 2961 aa3.42□□□□□ -1.86
CLK1-203ENST00000409769 EPG5Q9HCE0 2579 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 SMG1Q96Q15 3661 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 DSPP15924 2871 aaKnown RBP3.41□□□□□ -1.86
CLK1-203ENST00000409769 IGHV3-38A0A0C4DH36 116 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 EFCAB10A6NFE3 127 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 SLC22A20A6NK97 555 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 SNTNA6NMZ2 147 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 PRSS46E5RG02 174 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 RPL36A-HNRNPH2H7BZ11 118 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 M0R3G1 203 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 XKRYO14609 159 aa3.41□□□□□ -1.86
CLK1-203ENST00000409769 GPR171O14626 319 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms