RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 BRD4O60885 1362 aaPredicted RBP1.31□□□□□ -2.2
PMS1-203ENST00000409593 J3QT63 122 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 SIVA1O15304 175 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 HSBP1O75506 76 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 OR2A4O95047 310 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 IDI1Q13907 227 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 PRNTQ86SH4 94 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 TRAM1L1Q8N609 369 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.31□□□□□ -2.2
PMS1-203ENST00000409593 OR2A7Q96R45 310 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 PXMP2Q9NR77 195 aa1.31□□□□□ -2.2
PMS1-203ENST00000409593 GMNCA6NCL1 334 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 CCDC169A6NNP5 214 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 LEUTXA8MZ59 168 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 MLNP12872 115 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 PAX6P26367 422 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 ZNF83P51522 516 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 YWHAEP62258 255 aaKnown RBP1.3□□□□□ -2.2
PMS1-203ENST00000409593 IRF8Q02556 426 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 LINC00303Q3SY05 128 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 ZNF322Q6U7Q0 402 aaPredicted RBP1.3□□□□□ -2.2
PMS1-203ENST00000409593 OR10Z1Q8NGY1 313 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 BAALCQ8WXS3 180 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 TMEM234Q8WY98 164 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 TXNIPQ9H3M7 391 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 MRPL16Q9NX20 251 aaKnown RBP1.3□□□□□ -2.2
PMS1-203ENST00000409593 TAC3Q9UHF0 121 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 ORC6Q9Y5N6 252 aa1.3□□□□□ -2.2
PMS1-203ENST00000409593 SETD1AO15047 1707 aaKnown RBP1.3□□□□□ -2.2
PMS1-203ENST00000409593 TRGV4A0A0C4DH28 118 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 G3V3Q6 166 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 ISLRO14498 428 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 TRDMT1O14717 391 aaKnown RBP1.29□□□□□ -2.2
PMS1-203ENST00000409593 FFAR1O14842 300 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 PSIP1O75475 530 aaKnown RBP1.29□□□□□ -2.2
PMS1-203ENST00000409593 GCGP01275 180 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 CD82P27701 267 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 SLC18A1P54219 525 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 CLDN6P56747 220 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 DHRS2Q13268 280 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 KRTAP21-3Q3LHN1 58 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 VWDEQ8N2E2 1590 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 ZNF555Q8NEP9 628 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 GABRG3Q99928 467 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 SIGLEC1Q9BZZ2 1709 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 SRRQ9GZT4 340 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 PRO0628Q9UI54 55 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 IGHV3-21A0A0B4J1V1 117 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 H3BN98 237 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 DFFAO00273 331 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 DHRS3O75911 302 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 IGKV1D-33P01593 117 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 IGKV1-33P01594 117 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 PTMSP20962 102 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 CRABP2P29373 138 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 TAS2R39P59534 338 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 TMEM241Q24JQ0 296 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 VTCN1Q7Z7D3 282 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 MSRB3Q8IXL7 192 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 MICU2Q8IYU8 434 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 ZFP82Q8N141 532 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 C3orf22Q8N5N4 141 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 OR4K13Q8NH42 304 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 TNFRSF14Q92956 283 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 ISOC2Q96AB3 205 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 GABARAPL1Q9H0R8 117 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 AUNIPQ9H7T9 357 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 RBM22Q9NW64 420 aaKnown RBP eCLIP1.29□□□□□ -2.21e-7■■■■■ 30.3
PMS1-203ENST00000409593 MRPL22Q9NWU5 206 aaKnown RBP1.29□□□□□ -2.2
PMS1-203ENST00000409593 AHSPQ9NZD4 102 aa1.29□□□□□ -2.2
PMS1-203ENST00000409593 A0A1B0GU33 70 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 SLC22A20A6NK97 555 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 WRBO00258 174 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 GZMAP12544 262 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 RPS5P46782 204 aaKnown RBP1.28□□□□□ -2.2
PMS1-203ENST00000409593 CCL23P55773 120 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 BEX3Q00994 111 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 CLEC18BQ6UXF7 455 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 CLEC19AQ6UXS0 136 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 ZNF567Q8N184 647 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 Q8NAQ8 132 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 OR8A1Q8NGG7 326 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 OR10D4PQ8NGN7 298 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 OR2K2Q8NGT1 345 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 C2orf15Q8WU43 125 aaKnown RBP1.28□□□□□ -2.2
PMS1-203ENST00000409593 APOBEC3DQ96AK3 386 aaPredicted RBP1.28□□□□□ -2.2
PMS1-203ENST00000409593 RAD51AP1Q96B01 352 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 RHOFQ9HBH0 211 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 KLF13Q9Y2Y9 288 aaPredicted RBP1.28□□□□□ -2.2
PMS1-203ENST00000409593 KLF12Q9Y4X4 402 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 PLEKHG2Q9H7P9 1386 aa1.28□□□□□ -2.2
PMS1-203ENST00000409593 HELZ2Q9BYK8 2649 aaKnown RBP1.27□□□□□ -2.21
PMS1-203ENST00000409593 KMT2BQ9UMN6 2715 aaPredicted RBP1.27□□□□□ -2.21
PMS1-203ENST00000409593 A8MWP4 228 aa1.27□□□□□ -2.21
PMS1-203ENST00000409593 OR8G3PP0DMU2 310 aa1.27□□□□□ -2.21
PMS1-203ENST00000409593 TTMPQ5BVD1 217 aa1.27□□□□□ -2.21
PMS1-203ENST00000409593 TTC32Q5I0X7 151 aa1.27□□□□□ -2.21
PMS1-203ENST00000409593 TPRG1LQ5T0D9 272 aa1.27□□□□□ -2.21
PMS1-203ENST00000409593 MLIPQ5VWP3 458 aa1.27□□□□□ -2.21
PMS1-203ENST00000409593 OR4K2Q8NGD2 314 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms