RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 GSK3AP49840 483 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 UBA52P62987 128 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 SPEM2Q0P670 501 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 DRAM2Q6UX65 266 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 SLC16A14Q7RTX9 510 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 PUSL1Q8N0Z8 303 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 PNLDC1Q8NA58 520 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 FNDC9Q8TBE3 224 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 PP6455Q8WZ26 134 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 HDHD3Q9BSH5 251 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 GPR87Q9BY21 358 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 SLC7A10Q9NS82 523 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 ZFP57Q9NU63 452 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 ANAPC10Q9UM13 185 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 NOP16Q9Y3C1 178 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 IGKV1D-8A0A087WSZ0 117 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 A0A096LPE4 126 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 FAM230AA0A1W2PPH8 454 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 A0A1W2PPZ6 126 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 GPR31O00270 319 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 KRTAP27-1Q3LI81 207 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 RNF212Q495C1 297 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 FAM74A1Q5RGS3 127 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 GALNTL5Q7Z4T8 443 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 FAM89BQ8N5H3 189 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 TMEM251Q8N6I4 163 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 CPEB3Q8NE35 698 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 SEMA6DQ8NFY4 1073 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 OR56B1Q8NGI3 324 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 PLEKHA6Q9Y2H5 1048 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 MRPS18CQ9Y3D5 142 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 LIPGQ9Y5X9 500 aa13.2□□□□□ -0.3
SCAMP4-202ENST00000409472 SDCBPO00560 298 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 SCGNO76038 276 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 SPDEFO95238 335 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 CRYBA1P05813 215 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 GSTP1P09211 210 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 MMP7P09237 267 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 EDN3P14138 238 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 AKR1C4P17516 323 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 GABRR1P24046 479 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 MPZP25189 248 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 CD34P28906 385 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 BLVRBP30043 206 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 NPY4RP50391 375 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 ZNF92Q03936 586 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 ARFRP1Q13795 201 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 SLC25A42Q86VD7 318 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 TUSC5Q8IXB3 177 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 CASTOR1Q8WTX7 329 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 SEC22AQ96IW7 307 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 ST6GALNAC5Q9BVH7 336 aa13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 MYOZ1Q9NP98 299 aaPredicted RBP13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 DSPP15924 2871 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-202ENST00000409472 CCL2P13500 99 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 LRRC37A5PQ49AS3 106 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 CBLN2Q8IUK8 224 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 OR5M8Q8NGP6 311 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 THAP6Q8TBB0 222 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 URM1Q9BTM9 101 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 PECRQ9BY49 303 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 CALHM2Q9HA72 323 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 TMEM9BQ9NQ34 198 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 RASL12Q9NYN1 266 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 MCTS1Q9ULC4 181 aaKnown RBP13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 C9orf170A2RU37 121 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 VAMP1P23763 118 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 ALDH3B1P43353 468 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 MTCP1P56278 107 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 LYG2Q86SG7 212 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 BATF2Q8N1L9 274 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 CRIM1Q9NZV1 1036 aa13.18□□□□□ -0.3
SCAMP4-202ENST00000409472 ZNF729A6NN14 1252 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 IFNA6P05013 189 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 ZNF708P17019 499 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 SMCO1Q147U7 214 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 MPPED2Q15777 294 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 NKAPLQ5M9Q1 402 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 RIPPLY2Q5TAB7 128 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 JMJD6Q6NYC1 403 aaPredicted RBP13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 BEND4Q6ZU67 534 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 HOGA1Q86XE5 327 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 DYRK2Q92630 601 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 TMEM230Q96A57 120 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 IGKV1-12A0A0C4DH73 117 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 TMEM218A2RU14 115 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 UBE2CO00762 179 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 EFSO43281 561 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 IL2RAP01589 272 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 IGKV1D-12P01611 117 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 HEXAP06865 529 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 TMEM225BP0DP42 221 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 RPA2P15927 270 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 SNRPEP62304 92 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 ARF1P84077 181 aaKnown RBP13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 FAM219AQ8IW50 185 aa13.17□□□□□ -0.3
SCAMP4-202ENST00000409472 ZFP82Q8N141 532 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms