RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 ANGPTL4Q9BY76 406 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 OR52D1Q9H346 318 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 SPHK2Q9NRA0 654 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 VAX2Q9UIW0 290 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 DHDHQ9UQ10 334 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 PIN4Q9Y237 131 aaKnown RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 FARSAQ9Y285 508 aaKnown RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 HELZP42694 1942 aaKnown RBP4.78□□□□□ -1.64
CLK1-202ENST00000409403 HIVEP3Q5T1R4 2406 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 F5P12259 2224 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 CABIN1Q9Y6J0 2220 aa4.78□□□□□ -1.64
CLK1-202ENST00000409403 EVPLQ92817 2033 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 KIR2DL5BA0A0G2JN68 375 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 KIR2DL5BA0A0G2JPC4 375 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CPED1A4D0V7 1026 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 PGPEP1LA6NFU8 196 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TLCD2A6NGC4 264 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 LINC01548A6NM66 108 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 EEF1E1-BLOC1S5C9J1V9 151 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 BHLHE40O14503 412 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ZNF354AO60765 605 aaPredicted RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 CTAG2O75638 210 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CBR3O75828 277 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 APODP05090 189 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SOD3P08294 240 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CST2P09228 141 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 QDPRP09417 244 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SEC11BP0C7V7 166 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 LAMP2P13473 410 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CD22P20273 847 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 EPHA8P29322 1005 aaPredicted RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 NTSP30990 170 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 FRKP42685 505 aaPredicted RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 RPS11P62280 158 aaKnown RBP eCLIP4.77□□□□□ -1.65
CLK1-202ENST00000409403 HSF1Q00613 529 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 RAB35Q15286 201 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 RAB11BQ15907 218 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 Q499Y3 187 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 COL5A1-AS1Q5SY13 56 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 C1orf194Q5T5A4 169 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 STAC2Q6ZMT1 411 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 WDR88Q6ZMY6 472 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CHST9Q7L1S5 443 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC35E3Q7Z769 313 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TMPRSS12Q86WS5 348 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 FOXRED2Q8IWF2 684 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 NRMQ8IXM6 262 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC35F2Q8IXU6 374 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 KIR2DL5AQ8N109 375 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ZNF615Q8N8J6 731 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 MRPL43Q8N983 215 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR2L3Q8NG85 312 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR2D3Q8NGH3 330 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR13C5Q8NGS8 318 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 PPTC7Q8NI37 304 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 IGSF8Q969P0 613 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 NEIL2Q969S2 332 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TMEM18Q96B42 140 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ANKRD9Q96BM1 317 aaPredicted RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 DTD2Q96FN9 168 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ACY3Q96HD9 319 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SEC22AQ96IW7 307 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 URM1Q9BTM9 101 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC5A7Q9GZV3 580 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CHST6Q9GZX3 395 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 RAB33BQ9H082 229 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 METTL8Q9H825 291 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 GPR173Q9NS66 373 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 POT1Q9NUX5 634 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TMEM30AQ9NV96 361 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TMEM242Q9NWH2 141 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TAAR2Q9P1P5 351 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CACNG4Q9UBN1 327 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 AMDHD2Q9Y303 409 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLCO1B1Q9Y6L6 691 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 PRSS21Q9Y6M0 314 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 PCDH15Q96QU1 1955 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 VWA8A3KMH1 1905 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 MYO16Q9Y6X6 1858 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 YLPM1P49750 1951 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 ANKHD1Q8IWZ3 2542 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 IGLV3-16A0A075B6K0 115 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 TRAV18A0A075B6X5 111 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 K7EP13 123 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CCSO14618 274 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 AGPAT2O15120 278 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 DOK2O60496 412 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SOCS5O75159 536 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 GJB3O75712 270 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC2A10O95528 541 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 ETHE1O95571 254 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 IGLV3-27P01718 113 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 PPBPP02775 128 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SFTPBP07988 381 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 RHOCP08134 193 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 MRPL3P09001 348 aaKnown RBP4.77□□□□□ -1.65
CLK1-202ENST00000409403 OR8U9P0C7N5 309 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC2A5P22732 501 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 CD82P27701 267 aa4.77□□□□□ -1.65
CLK1-202ENST00000409403 SLC6A6P31641 620 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms