RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 CES1P1Q9UKY3 287 aa16.13■□□□□ 0.17
COL18A1-204ENST00000400337 SOX8P57073 446 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 RRASP10301 218 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 TIGITQ495A1 244 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 OR10AC1Q8NH08 325 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 SMIM7Q9BQ49 75 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 SEC16AO15027 2179 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 ARID1AO14497 2285 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 UBE2L5PA0A1B0GUS4 154 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 TRIM77I1YAP6 450 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 IGHA1P01876 353 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 CCL3P10147 92 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 ASCL1P50553 236 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 PPP1CBP62140 327 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 SLC36A1Q7Z2H8 476 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 ADAM10O14672 748 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 SLC25A4P12235 298 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 SELENOPP49908 381 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 ZNF90Q03938 601 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 C3AR1Q16581 482 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 MOB1BQ7L9L4 216 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 C9orf40Q8IXQ3 194 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 BPIFCQ8NFQ6 507 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 GPR87Q9BY21 358 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 SFT2D2O95562 160 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 PHYHD1Q5SRE7 291 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 ZBTB44Q8NCP5 570 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 HES7Q9BYE0 225 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 FAM96BQ9Y3D0 163 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 V9GYS6 101 aa16.12■□□□□ 0.17
COL18A1-204ENST00000400337 SCO1O75880 301 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 BPIFB3P59826 476 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 CENPVL1A0A0U1RR11 272 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 MAGEA5P43359 124 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 AANATQ16613 207 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 MOB3BQ86TA1 216 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 GPA33Q99795 319 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 SPINK2P20155 84 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 GNG10P50151 68 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 OR5M8Q8NGP6 311 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 ZNF71Q9NQZ8 489 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-204ENST00000400337 TUBAL3A6NHL2 446 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 MASP2O00187 686 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 RAG2P55895 527 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 STUMQ69YW2 141 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 ZNF770Q6IQ21 691 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-204ENST00000400337 TUSC5Q8IXB3 177 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 TMED3Q9Y3Q3 217 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 CABIN1Q9Y6J0 2220 aa16.11■□□□□ 0.17
COL18A1-204ENST00000400337 C9orf170A2RU37 121 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 GREM1O60565 184 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 CYC1P08574 325 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 ENDOGQ14249 297 aaKnown RBP16.1■□□□□ 0.17
COL18A1-204ENST00000400337 CACFD1Q9UGQ2 172 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 PSG11Q9UQ72 335 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 ADAM20O43506 726 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 FOXL2P58012 376 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 OR2B8PP59922 312 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 PCM1Q15154 2024 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 LRRC29Q8WV35 223 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 ACY3Q96HD9 319 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 RAB18Q9NP72 206 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 NIT2Q9NQR4 276 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 CALCRP30988 508 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 POM121L2Q96KW2 1035 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 SF3B5Q9BWJ5 86 aaKnown RBP16.1■□□□□ 0.17
COL18A1-204ENST00000400337 NINQ8N4C6 2090 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 ANKRD20A5PA0PJZ0 165 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 MARVELD1Q9BSK0 173 aa16.1■□□□□ 0.17
COL18A1-204ENST00000400337 MRPL22Q9NWU5 206 aaKnown RBP16.1■□□□□ 0.17
COL18A1-204ENST00000400337 IGKV1-8A0A0C4DH67 115 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 BTNL8Q6UX41 500 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 NARFLQ9H6Q4 476 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 FAM90A27PA6NNH2 459 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 LSM6P62312 80 aaKnown RBP16.09■□□□□ 0.17
COL18A1-204ENST00000400337 TMEM88Q6PEY1 159 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 SPAG17Q6Q759 2223 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 QSER1Q2KHR3 1735 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 FCGR3BO75015 233 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 MNX1P50219 401 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-204ENST00000400337 LYG1Q8N1E2 194 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 RHOFQ9HBH0 211 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 ZXDAP98168 799 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 CLEC12BQ2HXU8 276 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 OR13D1Q8NGV5 346 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 CCL17Q92583 94 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 TMEM230Q96A57 120 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 TM4SF19Q96DZ7 209 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 ZNF251Q9BRH9 671 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 TPRP12270 2363 aaKnown RBP16.09■□□□□ 0.17
COL18A1-204ENST00000400337 TMIGD3P0DMS9 266 aaPredicted RBP16.09■□□□□ 0.17
COL18A1-204ENST00000400337 RAB32Q13637 225 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 SLC25A30Q5SVS4 291 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 NHLRC1Q6VVB1 395 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 SKA3Q8IX90 412 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 OR5B3Q8NH48 314 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 UCN2Q96RP3 112 aa16.09■□□□□ 0.17
COL18A1-204ENST00000400337 C3orf85A0A1B0GTC6 90 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms