RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 ATP6V0CP27449 155 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 CDKN1BP46527 198 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 UBE2NP61088 152 aaKnown RBP8.89□□□□□ -0.99
PTPRM-203ENST00000400060 RND3P61587 244 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 CXCL16Q9H2A7 254 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 NAT8BQ9UHF3 227 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 MRM2Q9UI43 246 aaKnown RBP8.89□□□□□ -0.99
PTPRM-203ENST00000400060 CCL5P13501 91 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 PI3P19957 117 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 PLP1P60201 277 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 ERVK-16P61578 105 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 LSM6P62312 80 aaKnown RBP8.89□□□□□ -0.99
PTPRM-203ENST00000400060 LY6G6FQ5SQ64 297 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 OR4N5Q8IXE1 308 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 SUMF1Q8NBK3 374 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 AQP3Q92482 292 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 DPF1Q92782 380 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 DAZAP1Q96EP5 407 aaKnown RBP8.89□□□□□ -0.99
PTPRM-203ENST00000400060 ZFYVE21Q9BQ24 234 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM204Q9BSN7 226 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 GUSBP08236 651 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 SRP19P09132 144 aaKnown RBP8.89□□□□□ -0.99
PTPRM-203ENST00000400060 SLC35E2P0CK97 266 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 BIDP55957 195 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 RAC1P63000 192 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 AADACL3Q5VUY0 350 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 CATSPERDQ86XM0 798 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 OR10G8Q8NGN5 311 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 IFI44Q8TCB0 444 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 PPP1R3CQ9UQK1 317 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 RGPD3A6NKT7 1758 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-203ENST00000400060 RGPD4Q7Z3J3 1758 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 PRSS37A4D1T9 235 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 PRAMEF25A6NGN4 478 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 PRAMEF4O60810 478 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 GPM6BQ13491 265 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 MED25Q71SY5 747 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 BIVMQ86UB2 503 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 LSRQ86X29 649 aaPredicted RBP8.89□□□□□ -0.99
PTPRM-203ENST00000400060 GATSQ8NAP1 163 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 FGF14Q92915 247 aa8.89□□□□□ -0.99
PTPRM-203ENST00000400060 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 SDCBPO00560 298 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 TNFSF12O43508 249 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 ADRA2AP08913 450 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 SEC13P55735 322 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 LSM11P83369 360 aaKnown RBP eCLIP8.88□□□□□ -0.992e-6■■■□□ 19
PTPRM-203ENST00000400060 SRSF3P84103 164 aaKnown RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 UBE2V1Q13404 147 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF683Q8IZ20 524 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 RAB9BQ9NP90 201 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 FRRS1LQ9P0K9 344 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 LAMTOR2Q9Y2Q5 125 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 GBF1Q92538 1859 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF860A6NHJ4 632 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 SLC22A20A6NK97 555 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 CDC42EP2O14613 210 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 TTRP02766 147 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 HINT1P49773 126 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 PNKDQ8N490 385 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 OR52E1Q8NGJ3 308 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF707Q96C28 371 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 R3HDMLQ9H3Y0 253 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 CHODLQ9H9P2 273 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 LPAR2Q9HBW0 351 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 LIN7CQ9NUP9 197 aaKnown RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 WASHC3Q9Y3C0 194 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 TRAV30A0A087WSZ9 112 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 H0YL77 283 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 RIMS4Q9H426 269 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 WBP1LQ9NX94 342 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 RNF24Q9Y225 148 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 CCDC163A0A0D9SF12 145 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 LOC102725191A0A1B0GVB3 256 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 H7C1C5 153 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 CDC14BO60729 498 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF253O75346 499 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 TIMP2P16035 220 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 TSEN54Q7Z6J9 526 aaKnown RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 NHLRC2Q8NBF2 726 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 ZNF740Q8NDX6 193 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 OR5A2Q8NGI9 324 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 OR1L6Q8NGR2 347 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 DAZLQ92904 295 aaKnown RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 LINC00615Q96LM1 132 aaPredicted RBP8.88□□□□□ -0.99
PTPRM-203ENST00000400060 GPA33Q99795 319 aa8.88□□□□□ -0.99
PTPRM-203ENST00000400060 A0A1W2PR48 441 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 FAM24AA6NFZ4 105 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 KIAA1324LA8MWY0 1029 aaPredicted RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 JMJD7P0C870 316 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 DYNLT3P51808 116 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 SELENOTP62341 195 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 COL10A1Q03692 680 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TMEM267Q0VDI3 215 aaPredicted RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 OR8B8Q15620 311 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 FIGLAQ6QHK4 219 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 OLIG3Q7RTU3 272 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 FAM219AQ8IW50 185 aa8.87□□□□□ -0.99
PTPRM-203ENST00000400060 SLC25A43Q8WUT9 341 aaPredicted RBP8.87□□□□□ -0.99
PTPRM-203ENST00000400060 TXNIPQ9H3M7 391 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms