RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 GGNBP1Q5YKI7 109 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 OR1L1Q8NH94 360 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 BAHD1Q8TBE0 780 aaPredicted RBP7.94□□□□□ -1.14
PTPRM-202ENST00000400053 OR10C1Q96KK4 312 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 TMEM208Q9BTX3 173 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 IGF2P01344 180 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 TMEM183BQ1AE95 376 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 WDR38Q5JTN6 314 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 PRSS3P2Q8NHM4 247 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 TTC9Q92623 222 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 OR8B4Q96RC9 309 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 LRFN3Q9BTN0 628 aa7.94□□□□□ -1.14
PTPRM-202ENST00000400053 HMSDA8MTL9 139 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 KRASP01116 189 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 FZD2Q14332 565 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 WFDC8Q8IUA0 241 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 APOBEC3DQ96AK3 386 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 GSX1Q9H4S2 264 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 SEBOXQ9HB31 216 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 MYOZ1Q9NP98 299 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 UQCC1Q9NVA1 299 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 LSM2Q9Y333 95 aaKnown RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 PCM1Q15154 2024 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 A0A1W2PNV4 684 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 LINC00862A6NCI5 91 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 F5H697 171 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 MASP2O00187 686 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 DUS4LO95620 317 aaKnown RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 FAHP16930 419 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 HOXA4Q00056 320 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 C21orf62-AS1Q17RA5 79 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 RGS7BPQ6MZT1 257 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 SLC25A26Q70HW3 274 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 PARD6AQ9NPB6 346 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 BRWD3Q6RI45 1802 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 A0A1W2PN81 502 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 CDC42EP2O14613 210 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 CTAG2O75638 210 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 ADAP1O75689 374 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 GPANK1O95872 356 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 ONECUT2O95948 504 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 GALP22466 123 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 THBS4P35443 961 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 CHRNA7P36544 502 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 CSRP3P50461 194 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 PNLIPRP2P54317 469 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 OSR2Q8N2R0 312 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 OR52N4Q8NGI2 321 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 OR6S1Q8NH40 331 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 SPSB1Q96BD6 273 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 KCNK15Q9H427 330 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 PRDM7Q9NQW5 492 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 BET1LQ9NYM9 111 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 ST3GAL6Q9Y274 331 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 SVILO95425 2214 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 TRAV34A0A0B4J273 112 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 CLDN34H7C241 214 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 BMPR1BO00238 502 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 DHHO43323 396 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 CEACAM3P40198 252 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 ZNF121P58317 390 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 PTCRAQ6ISU1 281 aaPredicted RBP7.93□□□□□ -1.14
PTPRM-202ENST00000400053 CA13Q8N1Q1 262 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 OTOSQ8NHW6 89 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 RAB40CQ96S21 281 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 EDEM2Q9BV94 578 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 SLC35B3Q9H1N7 401 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 LRP12Q9Y561 859 aa7.93□□□□□ -1.14
PTPRM-202ENST00000400053 ZNF318Q5VUA4 2279 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 C5orf49A4QMS7 147 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 MBTPS2O43462 519 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 DEDDO75618 318 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 CD200P41217 278 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 KIR2DS2P43631 304 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 INSM1Q01101 510 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 TCTN1Q2MV58 587 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 OR4A4PQ8NGN8 299 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 TRAPPC1Q9Y5R8 145 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ALPK2Q86TB3 2170 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 C9orf170A2RU37 121 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 AP4M1O00189 453 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 LANCL1O43813 399 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 PPP2CBP62714 309 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 PPIAP62937 165 aaKnown RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 PPP2CAP67775 309 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 C19orf57Q0VDD7 668 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 PDCD1Q15116 288 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ZNF793Q6ZN11 406 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 TRILQ7L0X0 811 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ZDHHC22Q8N966 263 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 OR1L4Q8NGR5 311 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 CA5BP1Q8WTZ4 195 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 KTI12Q96EK9 354 aaPredicted RBP7.92□□□□□ -1.14
PTPRM-202ENST00000400053 C4orf45Q96LM5 186 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 FAAP24Q9BTP7 215 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 TMED3Q9Y3Q3 217 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 ANKRD20A5PA0PJZ0 165 aa7.92□□□□□ -1.14
PTPRM-202ENST00000400053 FGF2P09038 288 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms