RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 MRGPREQ86SM8 312 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 PATE1Q8WXA2 126 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 ARHGAP5-AS1Q96IT6 56 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 PARP12Q9H0J9 701 aaKnown RBP7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 RBM38Q9H0Z9 239 aaKnown RBP7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 THYN1Q9P016 225 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 TNFSF14O43557 240 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 SEMG1P04279 462 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 CDAP32320 146 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 PTTG1IPP53801 180 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 ZNF345Q14585 488 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 LGALSLQ3ZCW2 172 aaPredicted RBP7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 LHX8Q68G74 356 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 GPR87Q9BY21 358 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 FAM117AQ9C073 453 aa7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 MRPS18AQ9NVS2 196 aaKnown RBP7.45□□□□□ -1.22
SPTLC3-201ENST00000399002 ZNF785A8K8V0 405 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 ITGBL1O95965 494 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 NTF3P20783 257 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 PPP1R1AQ13522 171 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 COL19A1Q14993 1142 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 GGNBP1Q5YKI7 109 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 UBE3DQ7Z6J8 389 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 MUC20Q8N307 709 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 C17orf47Q8NEP4 570 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 OR1L3Q8NH93 324 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 SEC11CQ9BY50 192 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 ICAM5Q9UMF0 924 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 MAP1LC3B2A6NCE7 125 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 M0R1X1 148 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 CDC34P49427 236 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 LIMK1P53667 647 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 OR2B11Q5JQS5 317 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 BHLHA9Q7RTU4 235 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 OR8D4Q8NGM9 314 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 OR4S2Q8NH73 311 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 AKR7LQ8NHP1 331 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 MOB3AQ96BX8 217 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 MAP1LC3BQ9GZQ8 125 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 SMDT1Q9H4I9 107 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 PLEKHB1Q9UF11 243 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 PDE6DO43924 150 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC6A1P30531 599 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 AGFG1P52594 562 aaKnown RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 FAM3AP98173 230 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 TMEM267Q0VDI3 215 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 ZNF770Q6IQ21 691 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 ALG14Q96F25 216 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC2A9Q9NRM0 540 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 SIRT3Q9NTG7 399 aaPredicted RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 A0A1W2PPQ1 181 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 M0QZK8 103 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 GGCTO75223 188 aaKnown RBP7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 CA11O75493 328 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 GABRA1P14867 456 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 HNF1AP20823 631 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 IRF3Q14653 427 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 LILRA6Q6PI73 481 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 FAM219AQ8IW50 185 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 NEURL2Q9BR09 285 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC26A1Q9H2B4 701 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 FER1L6Q2WGJ9 1857 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 EPHA2P29317 976 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 NXPH1P58417 271 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 DOLPP1Q86YN1 238 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 OR2C3Q8N628 320 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 OR2M7Q8NG81 312 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 LRFN3Q9BTN0 628 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 MAGT1Q9H0U3 335 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 WSB1Q9Y6I7 421 aa7.44□□□□□ -1.22
SPTLC3-201ENST00000399002 LANCL1O43813 399 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 MMP9P14780 707 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 PNLIPP16233 465 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 CSF2RBP32927 897 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 MPV17LQ2QL34 196 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 Q56UQ5 140 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 GFRALQ6UXV0 394 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 GTF2H5Q6ZYL4 71 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC25A42Q86VD7 318 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC26A10Q8NG04 563 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 TMEM204Q9BSN7 226 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 ZFP64Q9NPA5 681 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 TECRQ9NZ01 308 aaKnown RBP7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 HLA-GP17693 338 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 KRTDAPP60985 99 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 COL9A2Q14055 689 aaPredicted RBP7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 MOB3BQ86TA1 216 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 TM4SF19Q96DZ7 209 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 R3HDMLQ9H3Y0 253 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 IGHV1OR21-1A0A087WYE8 117 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 KRASP01116 189 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 SLC25A5P05141 298 aaKnown RBP7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 BMP5P22003 454 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 HLA-DRB3P79483 266 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 ZNF154Q13106 437 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 KHDC3LQ587J8 217 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 LIAT1Q6ZQX7 453 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 ATG4DQ86TL0 474 aaPredicted RBP7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 V9GYH0 126 aa7.43□□□□□ -1.22
SPTLC3-201ENST00000399002 MS4A18H0YCH9 400 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms