RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 NRIP2Q9BQI9 281 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 PKIBQ9C010 78 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 SLITRK2Q9H156 845 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 BEX1Q9HBH7 125 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 C1RLQ9NZP8 487 aa10.99□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1W2PPH5 198 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1W2PRD5 423 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1W2PRF3 423 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1W2PRM7 423 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 MEIOCA2RUB1 952 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 BTBD17A6NE02 478 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 SNTNA6NMZ2 147 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 H0YAE9 185 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 ENTPD6O75354 484 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 NDUFA7O95182 113 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 PAHP00439 452 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 SERPINA3P01011 423 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 KNG1P01042 644 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 UBCP0CG48 685 aaKnown RBP10.98□□□□□ -0.65
VCX3A-202ENST00000398729 UBE2E1P51965 193 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 ISL1P61371 349 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 SNRPGP62308 76 aaKnown RBP10.98□□□□□ -0.65
VCX3A-202ENST00000398729 ACSM1Q08AH1 577 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 IL24Q13007 206 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 UBE2V2Q15819 145 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 ZIK1Q3SY52 487 aaPredicted RBP10.98□□□□□ -0.65
VCX3A-202ENST00000398729 TP53I3Q53FA7 332 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 SLC25A30Q5SVS4 291 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 KCTD20Q7Z5Y7 419 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 ANGPTL5Q86XS5 388 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 CALHM1Q8IU99 346 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 PRSS35Q8N3Z0 413 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 C10orf35Q96D05 121 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 RNFT2Q96EX2 444 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 CHST5Q9GZS9 411 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 HES4Q9HCC6 221 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 ZNRD1Q9P1U0 126 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 OR14J1Q9UGF5 321 aa10.98□□□□□ -0.65
VCX3A-202ENST00000398729 SF3B6Q9Y3B4 125 aaKnown RBP10.98□□□□□ -0.65
VCX3A-202ENST00000398729 LOC107986453A0A1B0GWG9 222 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 DAPL1A0PJW8 107 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 GPR137BO60478 399 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 SAA4P35542 130 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 CEBPDP49716 269 aaPredicted RBP10.97□□□□□ -0.65
VCX3A-202ENST00000398729 FUT6P51993 359 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 ERVK11-1P61568 191 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 RPL31P62899 125 aaKnown RBP10.97□□□□□ -0.65
VCX3A-202ENST00000398729 RELBQ01201 579 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 OCLNQ16625 522 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 TMEM244Q5VVB8 128 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 GDPGP1Q6ZNW5 385 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 BATF2Q8N1L9 274 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 CBR4Q8N4T8 237 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 C9orf16Q9BUW7 83 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 C19orf12Q9NSK7 152 aa10.97□□□□□ -0.65
VCX3A-202ENST00000398729 hCG_1809904A0A1W2PP81 198 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1W2PPE2 198 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1W2PR64 198 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 A0A1W2PRV1 198 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 CLPSL1A2RUU4 121 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 TK1P04183 234 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 KIR3DL2P43630 455 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 CNN3Q15417 329 aaKnown RBP10.96□□□□□ -0.65
VCX3A-202ENST00000398729 OLFML2AQ68BL7 652 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 C17orf107Q6ZR85 190 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 RDH10Q8IZV5 341 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 PNKDQ8N490 385 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 ACBD7Q8N6N7 88 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 OR2G2Q8NGZ5 317 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 PP6455Q8WZ26 134 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 BORCS8Q96FH0 119 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 MRPL48Q96GC5 212 aaKnown RBP10.96□□□□□ -0.65
VCX3A-202ENST00000398729 CEP19Q96LK0 163 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 MYCBPQ99417 103 aaPredicted RBP10.96□□□□□ -0.65
VCX3A-202ENST00000398729 FAM234AQ9H0X4 552 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 GMPPBQ9Y5P6 360 aa10.96□□□□□ -0.65
VCX3A-202ENST00000398729 E9PQ18 207 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 J3QRE1 110 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 EBAG9O00559 213 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 SLC16A6O15403 523 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 ANGPTL7O43827 346 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 MPZL2O60487 215 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 ISG15P05161 165 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 HTR1AP08908 422 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 OR12D2P58182 307 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 ACTA2P62736 377 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 ACTG2P63267 376 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 TAF9Q16594 264 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 TMEM200BQ69YZ2 307 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 FDX2Q6P4F2 183 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 SLC25A26Q70HW3 274 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 ASCC1Q8N9N2 400 aaKnown RBP10.95□□□□□ -0.66
VCX3A-202ENST00000398729 DNAAF1Q8NEP3 725 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 OR4M1Q8NGD0 313 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 OR5R1Q8NH85 324 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 WFDC12Q8WWY7 111 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 SLAMF9Q96A28 289 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 MBOAT4Q96T53 435 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 HEXA-AS1Q9H8Q6 139 aa10.95□□□□□ -0.66
VCX3A-202ENST00000398729 MTCH1Q9NZJ7 389 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms