RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 GLIPR2Q9H4G4 154 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ALKBH4Q9NXW9 302 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 KLRF1Q9NZS2 232 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 CBLCQ9ULV8 474 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 TNFSF18Q9UNG2 199 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 FOXJ3Q9UPW0 622 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR5H15A6NDH6 313 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 GAGE10A6NGK3 116 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR5H1A6NKK0 313 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 TNFRSF10CO14798 259 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 HPRT1P00492 218 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 CFDP00746 253 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ADH4P08319 380 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR13C7P0DN81 318 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 ACP5P13686 325 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 RRADP55042 308 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 PAX9P55771 341 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 CTBP2P56545 445 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 MRPS34P82930 218 aaKnown RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR1Q1Q15612 314 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 C4orf48Q5BLP8 95 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 MRGPREQ86SM8 312 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 SAMD12Q8N8I0 201 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 OR4A16Q8NH70 328 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC25A28Q96A46 364 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 VOPP1Q96AW1 172 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 GALMQ96C23 342 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 PIGMQ9H3S5 423 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 GALNT9Q9HCQ5 603 aa5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 THAP10Q9P2Z0 257 aaPredicted RBP5.81□□□□□ -1.48
TM9SF4-202ENST00000398022 A0A087WUJ7 227 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 DAPL1A0PJW8 107 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CCL16O15467 120 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ORM1P02763 201 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ISG15P05161 165 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 HMGN2P05204 90 aaKnown RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 AZU1P20160 251 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 IL2RGP31785 369 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CLDN12P56749 244 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 DLX2Q07687 328 aaPredicted RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM241Q24JQ0 296 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 PRRT3Q5FWE3 981 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF322Q6U7Q0 402 aaPredicted RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 COX15Q7KZN9 410 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 H2BFWTQ7Z2G1 175 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 TOMM5Q8N4H5 51 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 SLC30A7Q8NEW0 376 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 VN1R2Q8NFZ6 395 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 OR2AE1Q8NHA4 323 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 KLHDC7BQ96G42 594 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 C1orf159Q96HA4 380 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 P2RX4Q99571 388 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 NDC1Q9BTX1 674 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ABHD6Q9BV23 337 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 B3GAT2Q9NPZ5 323 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 HEYLQ9NQ87 328 aaPredicted RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 INPP5EQ9NRR6 644 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 RFNGQ9Y644 331 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 SPTBN2O15020 2390 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 PLXNA2O75051 1894 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 TPRP12270 2363 aaKnown RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 TMEM89A2RUT3 159 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM90A7PA6NKC0 464 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM90A22PA8MWA6 464 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM90A12PA8MX19 464 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 FAM90A23PA8MXZ1 464 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 RBFOX2O43251 390 aaKnown RBP eCLIP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 EEF1E1O43324 174 aaKnown RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 TMPRSS11DO60235 418 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 PAGE4O60829 102 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF205O95201 554 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 APODP05090 189 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CTSLP07711 333 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 UBBP0CG47 229 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ELK1P19419 428 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 RAB35Q15286 201 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 NR0B2Q15466 257 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 GABRA6Q16445 453 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 BCL2L15Q5TBC7 163 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 B3GNTL1Q67FW5 361 aaPredicted RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 WDR82Q6UXN9 313 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 GLCCI1Q86VQ1 547 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CMTM1Q8IZ96 169 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 AMER3Q8N944 861 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 OR51G2Q8NGK0 314 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 OR13G1Q8NGZ3 307 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 MS4A4EQ96PG1 132 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 S100A13Q99584 98 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 MCHR1Q99705 422 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 SPANXA1Q9NS26 97 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CLEC1BQ9P126 229 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CCL26Q9Y258 94 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 PCYT1BQ9Y5K3 369 aaPredicted RBP5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ZNF780BQ9Y6R6 833 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 V9GYY9 64 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 ZDBF2Q9HCK1 2354 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 A0A1B0GUS0 222 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 IGHA1P01876 353 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 CHRM4P08173 479 aa5.8□□□□□ -1.48
TM9SF4-202ENST00000398022 BMP5P22003 454 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms