RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 MEMO1Q9Y316 297 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 SDCBPO00560 298 aaPredicted RBP14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 CD27P26842 260 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 RPL12P30050 165 aaKnown RBP14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 CDAP32320 146 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 ZP4Q12836 540 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 FOXF1Q12946 379 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 IL15RAQ13261 267 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 GGNBP1Q5YKI7 109 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 SUMF2Q8NBJ7 301 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 MFSD8Q8NHS3 518 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 ARHGAP5-AS1Q96IT6 56 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 SIRT7Q9NRC8 400 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 FBXO7Q9Y3I1 522 aa14.04□□□□□ -0.16
CHMP1A-201ENST00000397901 CCDC187A0A096LP49 1063 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 C9J4A7 227 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 CDC14BO60729 498 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 CYTIPO60759 359 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 CRTAPO75718 401 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 CHRM2P08172 466 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 CD38P28907 300 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 CAMLGP49069 296 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 DHPSP49366 369 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 TMEM50BP56557 158 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 SUPT4H1P63272 117 aaKnown RBP14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 ARFRP1Q13795 201 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 JOSD1Q15040 202 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 SLC22A25Q6T423 547 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 OR5AS1Q8N127 324 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 LRRC18Q8N456 261 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 OR5H2Q8NGV7 314 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 R3HDM4Q96D70 268 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 GPER1Q99527 375 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 ST6GALNAC5Q9BVH7 336 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 DDA1Q9BW61 102 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 TMEM59Q9BXS4 323 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 C19orf12Q9NSK7 152 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 A0A1B0GW64 132 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 METTL12A8MUP2 240 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 K7EPK0 472 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 DVL1O14640 695 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 EREGO14944 169 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 GIMD1P0DJR0 217 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 AMY2BP19961 511 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 OR1D5P58170 312 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 PPA1Q15181 289 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 FAM71E2Q8N5Q1 922 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 SNIP1Q8TAD8 396 aaKnown RBP14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 HPSE2Q8WWQ2 592 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 C1orf147Q96MC9 270 aaPredicted RBP14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 ATG101Q9BSB4 218 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 NELFAQ9H3P2 528 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 SMDT1Q9H4I9 107 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 GPR84Q9NQS5 396 aa14.03□□□□□ -0.16
CHMP1A-201ENST00000397901 ZNF727A8MUV8 499 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 TRGC2P03986 189 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 GSTP1P09211 210 aaKnown RBP14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 SEC11BP0C7V7 166 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 FCGR2CP31995 323 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 ACY1Q03154 408 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 MFAP5Q13361 173 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 VAX1Q5SQQ9 334 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 CARD17Q5XLA6 110 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 C17orf82Q86X59 251 aaPredicted RBP14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 OR8B12Q8NGG6 310 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 OR5D18Q8NGL1 313 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 OR13G1Q8NGZ3 307 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 RTBDNQ9BSG5 229 aaPredicted RBP14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 SLC25A31Q9H0C2 315 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 SERINC1Q9NRX5 453 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 ZNF319Q9P2F9 582 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 LHFPL6Q9Y693 200 aa14.02□□□□□ -0.16
CHMP1A-201ENST00000397901 TNRC18O15417 2968 aaPredicted RBP14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 ANKUB1A6NFN9 424 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 RAMP1O60894 148 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 FOLR1P15328 257 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 GLRA1P23415 457 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 SLC35A1P78382 337 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF664Q8N3J9 261 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 LFNGQ8NES3 379 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 HIST1H2BLQ99880 126 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 ARV1Q9H2C2 271 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 FBLN5Q9UBX5 448 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 HS3ST3B1Q9Y662 390 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 SDK1Q7Z5N4 2213 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 UNC13CQ8NB66 2214 aa14.02□□□□□ -0.17
CHMP1A-201ENST00000397901 CYB5BO43169 146 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 CRYABP02511 175 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 HEXBP07686 556 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 TRGC1P0CF51 173 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 TAGLN2P37802 199 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 SUCLG1P53597 346 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF121P58317 390 aaPredicted RBP14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 ZNF343Q6P1L6 599 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 KCNG3Q8TAE7 436 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 ST8SIA1Q92185 356 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 DDIT4LQ96D03 193 aa14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 NUDT16L1Q9BRJ7 211 aaKnown RBP14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 UBE2ZQ9H832 354 aaPredicted RBP14.01□□□□□ -0.17
CHMP1A-201ENST00000397901 SRPK3Q9UPE1 567 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms