RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 SFTPBP07988 381 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 CD200P41217 278 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 MZT1Q08AG7 82 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 ZNF154Q13106 437 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 MAB21L1Q13394 359 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 OR8H2Q8N162 312 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 SCCPDHQ8NBX0 429 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 ACBD4Q8NC06 268 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 OR56B1Q8NGI3 324 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 OR10R2Q8NGX6 335 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 ELL3Q9HB65 397 aaPredicted RBP16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 RHOFQ9HBH0 211 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 PLSCR5A0PG75 271 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 F5H5P2 479 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 GABARAPH6UMI1 98 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 HTR3BO95264 441 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 CSTBP04080 98 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 ADH4P08319 380 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 OR4A8P0C604 315 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 CPT2P23786 658 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 NHLRC3Q5JS37 347 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 C11orf53Q8IXP5 236 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 YIPF5Q969M3 257 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 SELENOIQ9C0D9 397 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 PLK3Q9H4B4 646 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 AUNIPQ9H7T9 357 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 TAAR3PQ9P1P4 343 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 POU2F3Q9UKI9 436 aa16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 RBMX2Q9Y388 322 aaKnown RBP16.54■□□□□ 0.24
PDLIM2-205ENST00000397761 PTPN13Q12923 2485 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 TANC2Q9HCD6 1990 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 A0A1W2PQ09 198 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 VSTM5A8MXK1 200 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 CYB5AP00167 134 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 MELTFP08582 738 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 NPBWR2P48146 333 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 VEGFCP49767 419 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 DGCR2P98153 550 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 HACD4Q5VWC8 232 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 OSR2Q8N2R0 312 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 CELF2-AS1Q8N7Q2 184 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 OR51T1Q8NGJ9 327 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 LILRB1Q8NHL6 650 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 GTF3AQ92664 365 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 SLAMF9Q96A28 289 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 GAL3ST1Q99999 423 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 THAP7Q9BT49 309 aaPredicted RBP16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 POLDIP2Q9Y2S7 368 aa16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 ASH1LQ9NR48 2969 aaKnown RBP16.53■□□□□ 0.24
PDLIM2-205ENST00000397761 DYSFO75923 2080 aa16.52■□□□□ 0.24
PDLIM2-205ENST00000397761 F8VVB4 439 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 F8VWA3 439 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 TRAPPC2LH3BP13 241 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 NOS1APO75052 506 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 BCL3P20749 454 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 KIR2DL3P43628 341 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 TMEM50BP56557 158 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 FGF12P61328 243 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 ERVK11-1P61568 191 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 SCN1BQ07699 218 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 DAZAP2Q15038 168 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 EFNB3Q15768 340 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 ZNF260Q3ZCT1 412 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 OR2Z1Q8NG97 314 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM222BQ8WU58 562 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 HS3ST6Q96QI5 342 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 ZDHHC8Q9ULC8 765 aa16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 RAI1Q7Z5J4 1906 aaPredicted RBP16.52■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A10PA6NDY2 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A18PA6NE21 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A16PA6NEW6 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A20PA6NIJ5 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A8PA6NJQ4 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A7PA6NKC0 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A22PA8MWA6 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A12PA8MX19 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A5PA8MXJ8 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A23PA8MXZ1 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 PRSS44E7EML9 344 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 C19orf84I3L1E1 186 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 SOCS1O15524 211 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 RHBDL1O75783 438 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 PLAUP00749 431 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A15PP0C7V4 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A13PP0C7W8 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A14PP0C7W9 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FAM90A24PP0C7X0 464 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 SERPINF1P36955 418 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 RBM11P57052 281 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 PLAC9Q5JTB6 97 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 FBXL14Q8N1E6 418 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 SETD6Q8TBK2 473 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 NEUROG1Q92886 237 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 ELMOD3Q96FG2 381 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 NRIP2Q9BQI9 281 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 SCPEP1Q9HB40 452 aa16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 RBFOX1Q9NWB1 397 aaKnown RBP16.51■□□□□ 0.23
PDLIM2-205ENST00000397761 MEIOCA2RUB1 952 aa16.5■□□□□ 0.23
PDLIM2-205ENST00000397761 SULT1C2O00338 296 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms