RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ZNF92Q03936 586 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 TLE1Q04724 770 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 C4orf46Q504U0 113 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 Q6ZSR3 168 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 TMUB2Q71RG4 321 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 GALNT11Q8NCW6 608 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 PRR7Q8TB68 274 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 SCARB1Q8WTV0 552 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 STARD10Q9Y365 291 aa16.65■□□□□ 0.26
PDLIM2-204ENST00000397760 ZNF736B4DX44 427 aaPredicted RBP16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 GOSR2O14653 212 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 IGLV1-44P01699 117 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 ZNF35P13682 527 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 BDKRB2P30411 391 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 CCKARP32238 428 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 FGL1Q08830 312 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 MALLQ13021 153 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 PPA1Q15181 289 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 IGFBP7Q16270 282 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 ALKBH2Q6NS38 261 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 ZNF101Q8IZC7 436 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 OR5D14Q8NGL3 314 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 AQP3Q92482 292 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 SPSB4Q96A44 273 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 CCDC120Q96HB5 630 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 USB1Q9BQ65 265 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 TMEM138Q9NPI0 162 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 KCNN3Q9UGI6 736 aa16.64■□□□□ 0.25
PDLIM2-204ENST00000397760 RFPL4AA6NLU0 287 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 RFPL4AL1F8VTS6 287 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 BPNT1O95861 308 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 OR4E1P0C645 316 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 CECR9P0C854 216 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 ZNF735P0CB33 412 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 GNLYP22749 145 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 C12orf45Q8N5I9 185 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 JAGN1Q8N5M9 183 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 RBPMSQ93062 196 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 PRRT1Q99946 306 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 KCNK15Q9H427 330 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 POFUT1Q9H488 388 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 CGGBP1Q9UFW8 167 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 PIGLQ9Y2B2 252 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 COL6A6A6NMZ7 2263 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 IGHV1-18A0A0C4DH31 117 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 hCG_1807616A0A1W2PRN6 198 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 DISC1C4P0D8 188 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 ERCC1P07992 297 aaPredicted RBP16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 TBPP20226 339 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 ASCL1P50553 236 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 FAM3AP98173 230 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 SEMA6DQ8NFY4 1073 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 OR51A2Q8NGJ7 313 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 OR8S1Q8NH09 359 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 OR51B6Q9H340 312 aa16.63■□□□□ 0.25
PDLIM2-204ENST00000397760 hCG_38984A0A1B0GV85 526 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 CD8AP01732 235 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 AMY2AP04746 511 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 UQCRFS1P47985 274 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 ZNF83P51522 516 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 PRSS12P56730 875 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 SPOCK1Q08629 439 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 ZNF529Q6P280 563 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 TMEM65Q6PI78 240 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 OR5L1Q8NGL2 311 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 DVL3Q92997 716 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 FAM46BQ96A09 425 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 BBC3Q96PG8 261 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 RDH8Q9NYR8 311 aa16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 ERRFI1Q9UJM3 462 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-204ENST00000397760 MEIS3P1A6NDR6 274 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 ZSCAN5BA6NJL1 495 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 FAM90A27PA6NNH2 459 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 DHRS7CA6NNS2 312 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 ARPC5O15511 151 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 FAHP16930 419 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 HLA-GP17693 338 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 ACKR3P25106 362 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 GK2Q14410 553 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 C2orf68Q2NKX9 166 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 ZNF260Q3ZCT1 412 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 FAHD2BQ6P2I3 314 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 C11orf88Q6PI97 169 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 GSG1LQ6UXU4 331 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 C22orf34Q6ZV56 151 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 PGAP1Q75T13 922 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 BPIFB2Q8N4F0 458 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 ZDHHC22Q8N966 263 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 C10orf35Q96D05 121 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 FAHD2AQ96GK7 314 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 REPIN1Q9BWE0 567 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 SESN1Q9Y6P5 492 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 J3QW42 95 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 M0R1B8 84 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 SMPD2O60906 423 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 THBS4P35443 961 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 RGS7BPQ6MZT1 257 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 MRPL21Q7Z2W9 205 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 SLC51BQ86UW2 128 aa16.61■□□□□ 0.25
PDLIM2-204ENST00000397760 OR1M1Q8NGA1 313 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms