RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 UCP2P55851 309 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 CLEC2AQ6UVW9 174 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 DYNC2LI1Q8TCX1 351 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 IGHV3-43A0A0B4J1X8 118 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 ATP6V1G2-DDX39BF2Z307 99 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 BOLA2-SMG1P6H3BVE0 249 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 IGHV3-43DP0DP04 118 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 PRF1P14222 555 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 TUBG1P23258 451 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 ELP2Q6IA86 826 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 NFAM1Q8NET5 270 aaPredicted RBP13.49□□□□□ -0.25
LSS-202ENST00000397728 LINC01560Q8TB33 94 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 OCEL1Q9H607 264 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 LIN7CQ9NUP9 197 aaKnown RBP13.49□□□□□ -0.25
LSS-202ENST00000397728 FAM208BQ5VWN6 2430 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 NYNRINQ9P2P1 1898 aaKnown RBP13.49□□□□□ -0.25
LSS-202ENST00000397728 AGPAT2O15120 278 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 FABP7O15540 132 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 XRCC3O43542 346 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 PDCD6O75340 191 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 CALCRP30988 508 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 BAXQ07812 192 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 UBAC2Q8NBM4 344 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 MARCH1Q8TCQ1 289 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 ADAMTS17Q8TE56 1095 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 FYTTD1Q96QD9 318 aaKnown RBP13.49□□□□□ -0.25
LSS-202ENST00000397728 KLK11Q9UBX7 282 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 KCNMB2Q9Y691 235 aa13.49□□□□□ -0.25
LSS-202ENST00000397728 LOC102723996A0A087X1L8 192 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 PGA4P0DJD7 388 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 PGA3P0DJD8 388 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 PTBP1P26599 531 aaKnown RBP eCLIP13.48□□□□□ -0.254e-6■■■■□ 21
LSS-202ENST00000397728 C19orf57Q0VDD7 668 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 XAF1Q6GPH4 301 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 OR51A4Q8NGJ6 313 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 CNTNAP3BQ96NU0 1288 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 PTDSS2Q9BVG9 487 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 CLN8Q9UBY8 286 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 NOTCH2Q04721 2471 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 MS4A18H0YCH9 400 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 FGF9P31371 208 aaPredicted RBP13.48□□□□□ -0.25
LSS-202ENST00000397728 DCTDP32321 178 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 GGTLC2Q14390 218 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 MS4A18Q3C1V0 323 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 OR4S1Q8NGB4 309 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 PBDC1Q9BVG4 233 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 DSPPQ9NZW4 1301 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 DCTN6O00399 190 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 CCSO14618 274 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 ADRA2AP08913 450 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 PTHLHP12272 177 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 RPS4Y1P22090 263 aaKnown RBP13.48□□□□□ -0.25
LSS-202ENST00000397728 ZBTB25P24278 435 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 MMP16P51512 607 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 OR5V1Q9UGF6 321 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 RNF115Q9Y4L5 304 aa13.48□□□□□ -0.25
LSS-202ENST00000397728 CYTIPO60759 359 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 SIX6O95475 246 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 RRAS2P62070 204 aaPredicted RBP13.47□□□□□ -0.25
LSS-202ENST00000397728 PNLIPRP3Q17RR3 467 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 TMEM268Q5VZI3 342 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 PINX1Q96BK5 328 aaKnown RBP13.47□□□□□ -0.25
LSS-202ENST00000397728 ZNF230Q9UIE0 474 aaPredicted RBP13.47□□□□□ -0.25
LSS-202ENST00000397728 ZNF354AO60765 605 aaPredicted RBP13.47□□□□□ -0.25
LSS-202ENST00000397728 OR8U8P0C7N1 319 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 CEACAM6P40199 344 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 ST3GAL2Q16842 350 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 NHLRC1Q6VVB1 395 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 OR2W3Q7Z3T1 314 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 RTN4IP1Q8WWV3 396 aaPredicted RBP13.47□□□□□ -0.25
LSS-202ENST00000397728 PSG11Q9UQ72 335 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 NKX2-1P43699 371 aaPredicted RBP13.47□□□□□ -0.25
LSS-202ENST00000397728 OR3A1P47881 315 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 PDZD9Q8IXQ8 264 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 J3QT63 122 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 GMDSO60547 372 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 TPT1P13693 172 aaKnown RBP13.47□□□□□ -0.25
LSS-202ENST00000397728 STUMQ69YW2 141 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 CATSPERDQ86XM0 798 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 OR1K1Q8NGR3 316 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 MED30Q96HR3 178 aa13.47□□□□□ -0.25
LSS-202ENST00000397728 OR4C45A6NMZ5 311 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 GPR37O15354 613 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 PIGPP57054 158 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 ZNF816Q0VGE8 651 aaPredicted RBP13.46□□□□□ -0.25
LSS-202ENST00000397728 DMKNQ6E0U4 476 aaPredicted RBP13.46□□□□□ -0.25
LSS-202ENST00000397728 OR6C3Q9NZP0 311 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 ZNF724A8MTY0 619 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 B8ZZF3 427 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 NHLH1Q02575 133 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 SSX1Q16384 188 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 MOB1BQ7L9L4 216 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 RBMXL1Q96E39 390 aaKnown RBP13.46□□□□□ -0.25
LSS-202ENST00000397728 CACNA1AO00555 2505 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 SULT1C2O00338 296 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 AQP7O14520 342 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 TRAF3IP2O43734 574 aaPredicted RBP13.46□□□□□ -0.25
LSS-202ENST00000397728 OR4A8P0C604 315 aa13.46□□□□□ -0.25
LSS-202ENST00000397728 HIST1H1DP16402 221 aaKnown RBP13.46□□□□□ -0.25
LSS-202ENST00000397728 ALDH3B1P43353 468 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms