RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 MOGAT2Q3SYC2 334 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 ASCL4Q6XD76 172 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 OR2W3Q7Z3T1 314 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 MOGAT3Q86VF5 341 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 C11orf53Q8IXP5 236 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 ZSCAN4Q8NAM6 433 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-204ENST00000397443 OR4M2Q8NGB6 313 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 OR51T1Q8NGJ9 327 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 RAB40AQ8WXH6 277 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 HS3ST1O14792 307 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 GTF2F2P13984 249 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 RAB6AP20340 208 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 CD200P41217 278 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 SNRPD2P62316 118 aaKnown RBP17.94■□□□□ 0.46
CPNE1-204ENST00000397443 ZNF846Q147U1 533 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 SNX29P2Q8IUI4 249 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 VRK1Q99986 396 aaPredicted RBP17.94■□□□□ 0.46
CPNE1-204ENST00000397443 SPOCK3Q9BQ16 436 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 PKIBQ9C010 78 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 LPAR5Q9H1C0 372 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 IL36RNQ9UBH0 155 aa17.94■□□□□ 0.46
CPNE1-204ENST00000397443 GABRR1P24046 479 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 MPZP25189 248 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 SRP9P49458 86 aaKnown RBP17.93■□□□□ 0.46
CPNE1-204ENST00000397443 PDCD1Q15116 288 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 SWI5Q1ZZU3 235 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 RNASE12Q5GAN4 147 aaKnown RBP17.93■□□□□ 0.46
CPNE1-204ENST00000397443 TMEM69Q5SWH9 247 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 CMTM3Q96MX0 182 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 WDR12Q9GZL7 423 aaKnown RBP17.93■□□□□ 0.46
CPNE1-204ENST00000397443 ZMAT3Q9HA38 289 aaKnown RBP17.93■□□□□ 0.46
CPNE1-204ENST00000397443 POLDIP2Q9Y2S7 368 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 DOPEY2Q9Y3R5 2298 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 CRYBG3Q68DQ2 2970 aa17.93■□□□□ 0.46
CPNE1-204ENST00000397443 A0A0A6YYD4 124 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 METTL21EPA6NDL7 271 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 ZNF780AO75290 641 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-204ENST00000397443 SOD3P08294 240 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 PTHLHP12272 177 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 PRKACAP17612 351 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 ETV6P41212 452 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 RANBP1P43487 201 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 PITPNBP48739 271 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 RPS27AP62979 156 aaKnown RBP17.92■□□□□ 0.46
CPNE1-204ENST00000397443 ZNF45Q02386 682 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 GPR176Q14439 515 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 PYDC2Q56P42 97 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 SP5Q6BEB4 398 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-204ENST00000397443 RTN4RL2Q86UN3 420 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 OSR2Q8N2R0 312 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 GCDHQ92947 438 aaPredicted RBP17.92■□□□□ 0.46
CPNE1-204ENST00000397443 PTX4Q96A99 478 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 DECR2Q9NUI1 292 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 ZNF581Q9P0T4 197 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 IL19Q9UHD0 177 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 TRAV18A0A075B6X5 111 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 CLEC18AA5D8T8 446 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 ZNF79Q15937 498 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 TAF9Q16594 264 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 CLEC18BQ6UXF7 455 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 WDR82Q6UXN9 313 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 TMEM200AQ86VY9 491 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 SAXO1Q8IYX7 474 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 BOLLQ8N9W6 283 aaKnown RBP17.92■□□□□ 0.46
CPNE1-204ENST00000397443 CLEC18CQ8NCF0 446 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 CHST4Q8NCG5 386 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 CYYR1Q96J86 154 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 URM1Q9BTM9 101 aaKnown RBP17.92■□□□□ 0.46
CPNE1-204ENST00000397443 DIABLOQ9NR28 239 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 FBLN5Q9UBX5 448 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 LAMP3Q9UQV4 416 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 ST3GAL6Q9Y274 331 aa17.92■□□□□ 0.46
CPNE1-204ENST00000397443 WNT9BO14905 357 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 SOCS1O15524 211 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 COL8A1P27658 744 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 DUSP1P28562 367 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 EMG1Q92979 244 aaKnown RBP17.91■□□□□ 0.46
CPNE1-204ENST00000397443 SEH1LQ96EE3 360 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 WDR13Q9H1Z4 485 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 MS4A5Q9H3V2 200 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 FAIMQ9NVQ4 179 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 IL36GQ9NZH8 169 aa17.91■□□□□ 0.46
CPNE1-204ENST00000397443 GEMIN2O14893 280 aaKnown RBP17.9■□□□□ 0.46
CPNE1-204ENST00000397443 COX6B1P14854 86 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 TAS2R20P59543 309 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 TGIF2LYQ8IUE0 185 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 LRRC29Q8WV35 223 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 ABHD1Q96SE0 405 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 TLNRD1Q9H1K6 362 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 FN3KRPQ9HA64 309 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 SAP30LQ9HAJ7 183 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 CENPEQ02224 2701 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 NXPH2O95156 264 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 PMELP40967 661 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 AGAP6Q5VW22 663 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 Q96M66 194 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 DIRC2Q96SL1 478 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 GCM1Q9NP62 436 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 PCDHB16Q9NRJ7 776 aa17.9■□□□□ 0.46
CPNE1-204ENST00000397443 CBLN4Q9NTU7 201 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms