RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 IL18R1Q13478 541 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 ABCA11PQ4W5N1 156 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 C4orf46Q504U0 113 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 CEP78Q5JTW2 689 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 HACD2Q6Y1H2 254 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 RASSF6Q6ZTQ3 369 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.47□□□□□ -1.21
NEDD9-203ENST00000397378 ERI1Q8IV48 349 aaKnown RBP7.47□□□□□ -1.21
NEDD9-203ENST00000397378 OSR2Q8N2R0 312 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 OR8B12Q8NGG6 310 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 OR8D4Q8NGM9 314 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 PYURFQ96I23 114 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 GORASP2Q9H8Y8 452 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 EDA2RQ9HAV5 297 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 TBC1D23Q9NUY8 699 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 VNN3Q9NY84 501 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 BAIAP2Q9UQB8 552 aa7.47□□□□□ -1.21
NEDD9-203ENST00000397378 A0A0U1RQV5 110 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 NUDT19A8MXV4 375 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 J3QT63 122 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 NXPH2O95156 264 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 IFNGP01579 166 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 AMY1AP04745 511 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 AMY2AP04746 511 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 PIPP12273 146 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-203ENST00000397378 COX4I1P13073 169 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 GSTT1P30711 240 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 RRM2P31350 389 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 MYCNOSP40205 109 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 HMGA2P52926 109 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.22
NEDD9-203ENST00000397378 PSMA6P60900 246 aaKnown RBP7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ACTA2P62736 377 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 RPL23AP62750 156 aaKnown RBP7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ACTG2P63267 376 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ACTC1P68032 377 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ACTA1P68133 377 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 MEF2CQ06413 473 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-203ENST00000397378 LCN1P1Q5VSP4 162 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ZBTB49Q6ZSB9 765 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 C8orf86Q6ZUL3 223 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 IQCF2Q8IXL9 164 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 LINC00471Q8N535 108 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 NDNFQ8TB73 568 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 FAM81AQ8TBF8 368 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 GATAD1Q8WUU5 269 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 CAPSLQ8WWF8 208 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ZNF488Q96MN9 340 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ZNF714Q96N38 554 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 P2RX4Q99571 388 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 NRIP2Q9BQI9 281 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 BTBD10Q9BSF8 475 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 SLC25A33Q9BSK2 321 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 TSSK6Q9BXA6 273 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 NIPAL2Q9H841 368 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 EFCAB1Q9HAE3 211 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 HES4Q9HCC6 221 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 ZNF256Q9Y2P7 627 aaPredicted RBP7.46□□□□□ -1.22
NEDD9-203ENST00000397378 POLDIP2Q9Y2S7 368 aa7.46□□□□□ -1.22
NEDD9-203ENST00000397378 IGHV2-26A0A0B4J1V2 119 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 ACOD1A6NK06 481 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 M0QZK8 103 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 SLC25A17O43808 307 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 ZNF737O75373 536 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 GMNNO75496 209 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 DNAJC8O75937 253 aaPredicted RBP7.45□□□□□ -1.22
NEDD9-203ENST00000397378 KRT36O76013 467 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 OR2F2O95006 317 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 LYNP07948 512 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 ZNF3P17036 446 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 HTR1DP28221 377 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 BRS3P32247 399 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 NUDT2P50583 147 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 SAMD4BQ5PRF9 694 aaKnown RBP7.45□□□□□ -1.22
NEDD9-203ENST00000397378 C9orf66Q5T8R8 295 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 CGB2Q6NT52 195 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 MOB3CQ70IA8 216 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 TCF23Q7RTU1 214 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 TRPM8Q7Z2W7 1104 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 OR2W3Q7Z3T1 314 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 ZNF573Q86YE8 665 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 ZNF454Q8N9F8 522 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 OR2T33Q8NG76 320 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 OR9Q2Q8NGE9 314 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 OR4Q3Q8NH05 313 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 OTOSQ8NHW6 89 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 MCUR1Q96AQ8 359 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 RBM14Q96PK6 669 aaKnown RBP7.45□□□□□ -1.22
NEDD9-203ENST00000397378 CLEC7AQ9BXN2 247 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 IL1RAPQ9NPH3 570 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 CMC2Q9NRP2 79 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 ZFP57Q9NU63 452 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 OR14J1Q9UGF5 321 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 SESN1Q9Y6P5 492 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 V9GYQ6 96 aa7.45□□□□□ -1.22
NEDD9-203ENST00000397378 PSMB11A5LHX3 300 aa7.44□□□□□ -1.22
NEDD9-203ENST00000397378 RIIAD1A6NNX1 92 aa7.44□□□□□ -1.22
NEDD9-203ENST00000397378 NRASP01111 189 aa7.44□□□□□ -1.22
NEDD9-203ENST00000397378 IGLV3-1P01715 115 aa7.44□□□□□ -1.22
NEDD9-203ENST00000397378 FABP3P05413 133 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms