RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 MAP1LC3BQ9GZQ8 125 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 OCIAD1Q9NX40 245 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 ACAA1P09110 424 aaPredicted RBP11.06□□□□□ -0.64
SMU1-201ENST00000397149 CEACAM3P40198 252 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 CD96P40200 585 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 RIGQ13278 110 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 PSG5Q15238 335 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 RHBDD2Q6NTF9 364 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 VN1R1Q9GZP7 353 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 AURKAIP1Q9NWT8 199 aaPredicted RBP11.06□□□□□ -0.64
SMU1-201ENST00000397149 C7orf72A4D263 438 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 CD27P26842 260 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 CSNK1DP48730 415 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 WDR88Q6ZMY6 472 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 LRRC29Q8WV35 223 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 SSMEM1Q8WWF3 244 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 SLC25A33Q9BSK2 321 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 UBE2ZQ9H832 354 aaPredicted RBP11.06□□□□□ -0.64
SMU1-201ENST00000397149 MBNL1Q9NR56 388 aaKnown RBP11.06□□□□□ -0.64
SMU1-201ENST00000397149 IGKV6D-41A0A0C4DH26 115 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 FAM71E1Q6IPT2 247 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 ZNF880Q6PDB4 577 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 CALHM1Q8IU99 346 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 SIGLEC11Q96RL6 698 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 ANXA10Q9UJ72 324 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 CES1P1Q9UKY3 287 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 R4GMQ9 66 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 K7ESM1 405 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 GABRB1P18505 474 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 NCMAPQ5T1S8 102 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 NUDT8Q8WV74 236 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 PCGF1Q9BSM1 259 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 SLC26A1Q9H2B4 701 aa11.06□□□□□ -0.64
SMU1-201ENST00000397149 VAMP5O95183 116 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 CRYABP02511 175 aaKnown RBP11.05□□□□□ -0.64
SMU1-201ENST00000397149 OR4P4Q8NGL7 312 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 NEURL3Q96EH8 262 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 WSB1Q9Y6I7 421 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 ARHGEF28Q8N1W1 1705 aaKnown RBP11.05□□□□□ -0.64
SMU1-201ENST00000397149 PSMB11A5LHX3 300 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 FUT6P51993 359 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 SLCO4C1Q6ZQN7 724 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 VN1R17PQ8TDU5 208 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 BRS3P32247 399 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 EMDP50402 254 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 ZNF766Q5HY98 468 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 ABHD17CQ6PCB6 329 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 SLC16A13Q7RTY0 426 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 GABRG3Q99928 467 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 NPFFR1Q9GZQ6 430 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 CACNG5Q9UF02 275 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 TMEM204Q9BSN7 226 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 SH2D2AQ9NP31 389 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 PARM1Q6UWI2 310 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 ARIH2OSQ8N7S6 290 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 SLC25A46Q96AG3 418 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 TBC1D29Q9UFV1 150 aa11.05□□□□□ -0.64
SMU1-201ENST00000397149 PRSS37A4D1T9 235 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 PLP1P60201 277 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 FUT7Q11130 342 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 PHOSPHO2Q8TCD6 241 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 KLK11Q9UBX7 282 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 SLC17A2O00624 439 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 STARD4Q96DR4 205 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 MEGF10Q96KG7 1140 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 MS4A7Q9GZW8 240 aaPredicted RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 ISG20L2Q9H9L3 353 aaKnown RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 FKBP11Q9NYL4 201 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 SLC6A1P30531 599 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 ID1P41134 155 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 MEOX2P50222 304 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 TCTN3Q6NUS6 607 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 NUFIP2Q7Z417 695 aaKnown RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 SNRNP40Q96DI7 357 aaKnown RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 NEIL1Q96FI4 390 aaPredicted RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 JAM3Q9BX67 310 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 KLK15Q9H2R5 256 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 PITPNC1Q9UKF7 332 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 A0A1W2PPC4 97 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 LANCL1O43813 399 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 C1QBP02746 253 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 GPR3P46089 330 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 TMEM215Q68D42 235 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 PTRH1Q86Y79 214 aaKnown RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 WDR13Q9H1Z4 485 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 HSF4Q9ULV5 492 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 TMEM238LA0A1B0GVL6 79 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 TUBAL3A6NHL2 446 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 A6NJY4 79 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 DNAL4O96015 105 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 ZNF735P0CB33 412 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 ZNF26P17031 533 aaPredicted RBP11.04□□□□□ -0.64
SMU1-201ENST00000397149 HOXC13P31276 330 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 OR2V1Q8NHB1 315 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 FBXL17Q9UF56 701 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 CROCCQ5TZA2 2017 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 TCHHQ07283 1943 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 ATF1P18846 271 aa11.04□□□□□ -0.64
SMU1-201ENST00000397149 ANKRD55Q3KP44 614 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms