RNA–Protein interactions for RNA: ENST00000397017.6

MCF2L-205, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 3,903 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-205ENST00000397017 RBPJQ06330 500 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 FOXO1Q12778 655 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 OR14K1Q8NGZ2 314 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 SLC25A21Q9BQT8 299 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-205ENST00000397017 ZNF728P0DKX0 622 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 CLDN18P56856 261 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 PPP1CBP62140 327 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 ASCL5Q7RTU5 278 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 ZNF610Q8N9Z0 462 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 ST6GAL2Q96JF0 529 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 SCPEP1Q9HB40 452 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 RNF150Q9ULK6 438 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 KCNK7Q9Y2U2 307 aa13.23□□□□□ -0.29
MCF2L-205ENST00000397017 NCOA6Q14686 2063 aaPredicted RBP13.23□□□□□ -0.29
MCF2L-205ENST00000397017 FAM90A27PA6NNH2 459 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 PHF1O43189 567 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-205ENST00000397017 OMGP23515 440 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 ERVS71-1P61550 626 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 KLF9Q13886 244 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-205ENST00000397017 FAM214BQ7L5A3 538 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 TMEM123Q8N131 208 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 SPSB1Q96BD6 273 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 ADAT1Q9BUB4 502 aaKnown RBP13.22□□□□□ -0.29
MCF2L-205ENST00000397017 CHST5Q9GZS9 411 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.299e-7■■□□□ 13.3
MCF2L-205ENST00000397017 ZNF716A6NP11 495 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 CRYABP02511 175 aaKnown RBP13.22□□□□□ -0.29
MCF2L-205ENST00000397017 IRF2P14316 349 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 GK2Q14410 553 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-205ENST00000397017 ELP2Q6IA86 826 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 PRRX2Q99811 253 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 ZNF175Q9Y473 711 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 WT1P19544 449 aaPredicted RBP13.22□□□□□ -0.29
MCF2L-205ENST00000397017 SWI5Q1ZZU3 235 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 ZNF695Q8IW36 515 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 SLC25A40Q8TBP6 338 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 RTL8AQ9BWD3 113 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 MAB21L2Q9Y586 359 aa13.22□□□□□ -0.29
MCF2L-205ENST00000397017 NDUFB6O95139 128 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 OR8B8Q15620 311 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 CD276Q5ZPR3 534 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 CPEB3Q8NE35 698 aaKnown RBP13.21□□□□□ -0.29
MCF2L-205ENST00000397017 SPRR3Q9UBC9 169 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 ATP23Q9Y6H3 246 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 OR14I1A6ND48 311 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 SERPINE2P07093 398 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 CELA3BP08861 270 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 DUSP18Q8NEJ0 188 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 OR2AK2Q8NG84 335 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 WDR13Q9H1Z4 485 aa13.21□□□□□ -0.29
MCF2L-205ENST00000397017 A0A1B0GTI1 187 aa13.21□□□□□ -0.3
MCF2L-205ENST00000397017 C10orf142B7Z368 130 aa13.21□□□□□ -0.3
MCF2L-205ENST00000397017 ZNF708P17019 499 aa13.21□□□□□ -0.3
MCF2L-205ENST00000397017 ZNF718Q3SXZ3 478 aa13.21□□□□□ -0.3
MCF2L-205ENST00000397017 RTN4RL2Q86UN3 420 aa13.21□□□□□ -0.3
MCF2L-205ENST00000397017 VRK1Q99986 396 aaPredicted RBP13.21□□□□□ -0.3
MCF2L-205ENST00000397017 C12orf4Q9NQ89 552 aa13.21□□□□□ -0.3
MCF2L-205ENST00000397017 EML6Q6ZMW3 1958 aa13.21□□□□□ -0.3
MCF2L-205ENST00000397017 MEIKINA0A087WXM9 373 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 RAB27BO00194 218 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 NTF4P34130 210 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 PPP1R1AQ13522 171 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 ZNF573Q86YE8 665 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 ZNF808Q8N4W9 903 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-205ENST00000397017 ABCA1O95477 2261 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 B8ZZF3 427 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 ATF4P18848 351 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-205ENST00000397017 NPBWR2P48146 333 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 GZMKP49863 264 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 RAP2BP61225 183 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 IAH1Q2TAA2 248 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-205ENST00000397017 PLA1AQ53H76 456 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 TMEM54Q969K7 222 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 WDR89Q96FK6 387 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-205ENST00000397017 GPHA2Q96T91 129 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 LPAR5Q9H1C0 372 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 GNG12Q9UBI6 72 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 PFDN2Q9UHV9 154 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 ITGB1BP2Q9UKP3 347 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 TUSC2O75896 110 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 BCL3P20749 454 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 ZNF133P52736 654 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-205ENST00000397017 OR2A2Q6IF42 318 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 ZNF826PQ6ZT77 177 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 CMTM1Q8IZ96 169 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 AGPAT2O15120 278 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 SERPINF1P36955 418 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 GNG3P63215 75 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 H3F3AP84243 136 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 RFPL4BQ6ZWI9 263 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 TERB2Q8NHR7 220 aa13.2□□□□□ -0.3
MCF2L-205ENST00000397017 A0A0B4J2A0 478 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 FBXO24O75426 580 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 GSTP1P09211 210 aaKnown RBP13.19□□□□□ -0.3
MCF2L-205ENST00000397017 DHRS2Q13268 280 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 NLRC3Q7RTR2 1065 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 PRSS33Q8NF86 280 aa13.19□□□□□ -0.3
MCF2L-205ENST00000397017 OR11H7Q8NGC8 314 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms