RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 TAAR9Q96RI9 348 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 NIT2Q9NQR4 276 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 SEMA5BQ9P283 1151 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 ANXA10Q9UJ72 324 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 TINAGQ9UJW2 476 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 GDF9O60383 454 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 CTSDP07339 412 aaPredicted RBP12.13□□□□□ -0.47
NUP98-204ENST00000397004 NQO2P16083 231 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 CTSSP25774 331 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 NTF4P34130 210 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 CSNK1A1P48729 337 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 RAB5BP61020 215 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 SURF2Q15527 256 aaPredicted RBP12.13□□□□□ -0.47
NUP98-204ENST00000397004 SULF2Q8IWU5 870 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 OR2M3Q8NG83 312 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 HAS2Q92819 552 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 MRGPRX4Q96LA9 322 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 PIGLQ9Y2B2 252 aa12.13□□□□□ -0.47
NUP98-204ENST00000397004 PET100P0DJ07 73 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 ZNF616Q08AN1 781 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 KRBOX4Q5JUW0 171 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 CHST5Q9GZS9 411 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 PPP4R1LQ9P1A2 415 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 PADI1Q9ULC6 663 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 FBXO7Q9Y3I1 522 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 SERPINE3A8MV23 424 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 RRP8O43159 456 aaKnown RBP12.12□□□□□ -0.47
NUP98-204ENST00000397004 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 OR5H8P0DN80 308 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 TMEM225BP0DP42 221 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 RAB5AP20339 215 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 RBMXP38159 391 aaKnown RBP12.12□□□□□ -0.47
NUP98-204ENST00000397004 SUMO3P55854 103 aaPredicted RBP12.12□□□□□ -0.47
NUP98-204ENST00000397004 RNF212Q495C1 297 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 PLXDC2Q6UX71 529 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 ODF3L1Q8IXM7 274 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 TOMM40LQ969M1 308 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 MSI2Q96DH6 328 aaKnown RBP12.12□□□□□ -0.47
NUP98-204ENST00000397004 UCN2Q96RP3 112 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 ELL3Q9HB65 397 aaPredicted RBP12.12□□□□□ -0.47
NUP98-204ENST00000397004 NXT1Q9UKK6 140 aaKnown RBP12.12□□□□□ -0.47
NUP98-204ENST00000397004 HSF4Q9ULV5 492 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 MT-ND4LP03901 98 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 CELA2AP08217 269 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 CD27P26842 260 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 OTX1P32242 354 aaPredicted RBP12.12□□□□□ -0.47
NUP98-204ENST00000397004 ARL4DP49703 201 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 CLDN17P56750 224 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 IGSF11Q5DX21 431 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 PGAM5Q96HS1 289 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 GPR173Q9NS66 373 aa12.12□□□□□ -0.47
NUP98-204ENST00000397004 C1orf196B1AJZ1 125 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 DHRS3O75911 302 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 IGHV2-70P01814 119 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 SULT1A1P50225 295 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 PHLDA2Q53GA4 152 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 PRAMEF20Q5VT98 475 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 AKR7LQ8NHP1 331 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 SGK3Q96BR1 496 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 GPHA2Q96T91 129 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 GINS3Q9BRX5 216 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 TGIF2Q9GZN2 237 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 MIOXQ9UGB7 285 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 C14orf166Q9Y224 244 aaKnown RBP12.11□□□□□ -0.47
NUP98-204ENST00000397004 IGLV3-12A0A075B6K2 115 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 PIAS2O75928 621 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 TSPAN15O95858 294 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 ZNF41P51814 821 aaPredicted RBP12.11□□□□□ -0.47
NUP98-204ENST00000397004 H3F3AP84243 136 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 HAGHQ16775 308 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 PIGYQ3MUY2 71 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 NAXEQ8NCW5 288 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 SCGB3A2Q96PL1 93 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 PLEKHJ1Q9NW61 149 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 MYOTQ9UBF9 498 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 METTL1Q9UBP6 276 aaKnown RBP12.11□□□□□ -0.47
NUP98-204ENST00000397004 KPTNQ9Y664 436 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 COL6A3P12111 3177 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 IGLV3-32A0A0A0MS00 114 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 AQP7P3A6NL99 342 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 SMIM6P0DI80 62 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 NCMAPQ5T1S8 102 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 Q6ZSR3 168 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 HSD17B11Q8NBQ5 300 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 OXGR1Q96P68 337 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 C11orf1Q9H5F2 150 aa12.11□□□□□ -0.47
NUP98-204ENST00000397004 HEXBP07686 556 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 OR13C7P0DN81 318 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 RPS23P62266 143 aaKnown RBP12.1□□□□□ -0.47
NUP98-204ENST00000397004 OPN5Q6U736 354 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 SGPP2Q8IWX5 399 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ZNF160Q9HCG1 818 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ZMAT5Q9UDW3 170 aaKnown RBP12.1□□□□□ -0.47
NUP98-204ENST00000397004 POMT1Q9Y6A1 747 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ASPMQ8IZT6 3477 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 GPR37O15354 613 aa12.1□□□□□ -0.47
NUP98-204ENST00000397004 ZNF806P0C7X5 589 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms