RNA–Protein interactions for RNA: ENST00000396308.3

VAMP1-202, Transcript of vesicle associated membrane protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VAMP1, Length 1,113 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-202ENST00000396308 XRCC3O43542 346 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 PLAUP00749 431 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 IGHV1-46P01743 117 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 ADH4P08319 380 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 INHBBP09529 407 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 IRF2P14316 349 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 LOXP28300 417 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-202ENST00000396308 EFNB2P52799 333 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 MRPS10P82664 201 aaKnown RBP13.09□□□□□ -0.31
VAMP1-202ENST00000396308 QRFPP83859 136 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 DCTN2Q13561 401 aaKnown RBP13.09□□□□□ -0.31
VAMP1-202ENST00000396308 FAM76BQ5HYJ3 339 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 LINC00596Q86U02 117 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 ACBD4Q8NC06 268 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 NEUROG1Q92886 237 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 HPS1Q92902 700 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 EMG1Q92979 244 aaKnown RBP13.09□□□□□ -0.31
VAMP1-202ENST00000396308 ERGIC1Q969X5 290 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 POM121Q96HA1 1249 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 MEGF10Q96KG7 1140 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 C1orf147Q96MC9 270 aaPredicted RBP13.09□□□□□ -0.31
VAMP1-202ENST00000396308 PALMDQ9NP74 551 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 GLS2Q9UI32 602 aa13.09□□□□□ -0.31
VAMP1-202ENST00000396308 ANKHD1Q8IWZ3 2542 aaKnown RBP13.09□□□□□ -0.31
VAMP1-202ENST00000396308 CADP27708 2225 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 CDIPTO14735 213 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 SYNGR1O43759 233 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 NXPH2O95156 264 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 CD55P08174 381 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 COX6B1P14854 86 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 BCL3P20749 454 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 VEGFCP49767 419 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 FGF12P61328 243 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 PRAMEF6Q5VXH4 476 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 TRIQKQ629K1 86 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 ELP2Q6IA86 826 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 CRIP3Q6Q6R5 217 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 C1QL2Q7Z5L3 287 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 WDR86Q86TI4 376 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 OR8H2Q8N162 312 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 CHST4Q8NCG5 386 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 TMEM104Q8NE00 496 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 GTF3AQ92664 365 aaKnown RBP13.08□□□□□ -0.32
VAMP1-202ENST00000396308 TM2D1Q9BX74 207 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 LPAR5Q9H1C0 372 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 TLNRD1Q9H1K6 362 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 UFSP2Q9NUQ7 469 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 C1orf123Q9NWV4 160 aa13.08□□□□□ -0.32
VAMP1-202ENST00000396308 TRAV18A0A075B6X5 111 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 A0A0G2JMP0 313 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 A0A0X1KG70 313 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 LRRC30A6NM36 301 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 J3QRK9 145 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 AKR7A2O43488 359 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 PRKACAP17612 351 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 GABRR1P24046 479 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 GATA4P43694 442 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 PPOXP50336 477 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 RBM11P57052 281 aaKnown RBP13.07□□□□□ -0.32
VAMP1-202ENST00000396308 TAS2R20P59543 309 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 MAB21L1Q13394 359 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 MADCAM1Q13477 382 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 SMIM21Q3B7S5 101 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 SNX29P2Q8IUI4 249 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 IZUMO1Q8IYV9 350 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 FAM58AQ8N1B3 248 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 POC1AQ8NBT0 407 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 OR4M2Q8NGB6 313 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 OR10R2Q8NGX6 335 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 OR10Z1Q8NGY1 313 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 RAB3CQ96E17 227 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 Q96M66 194 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 NEDD4LQ96PU5 975 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 SRRQ9GZT4 340 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 UBTD1Q9HAC8 227 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 CBLN4Q9NTU7 201 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 ST3GAL6Q9Y274 331 aa13.07□□□□□ -0.32
VAMP1-202ENST00000396308 IGKV1-12A0A0C4DH73 117 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 IGHV3-64DA0A0J9YX35 117 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 A0A1W2PP11 408 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A10PA6NDY2 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A18PA6NE21 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A16PA6NEW6 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A20PA6NIJ5 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A8PA6NJQ4 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A7PA6NKC0 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A22PA8MWA6 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A12PA8MX19 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A5PA8MXJ8 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A23PA8MXZ1 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 IFNL4K9M1U5 179 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 PTBP3O95758 552 aaKnown RBP13.06□□□□□ -0.32
VAMP1-202ENST00000396308 IGKV1D-12P01611 117 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 ACAA1P09110 424 aaPredicted RBP13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A15PP0C7V4 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A13PP0C7W8 464 aa13.06□□□□□ -0.32
VAMP1-202ENST00000396308 FAM90A14PP0C7W9 464 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms