RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 SYCE1LA8MT33 242 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 ANKRD65E5RJM6 399 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 FTCDNL1E5RQL4 147 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 H7C2Y5 167 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 FADS1O60427 444 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 NOS1APO75052 506 aaPredicted RBP3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 CA11O75493 328 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 CTDNEP1O95476 244 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 RAB36O95755 333 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 SERPINA1P01009 418 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 TCRBP04435 133 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 GFAPP14136 432 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 GNRHRP30968 328 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 PSME3P61289 254 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 RPL19P84098 196 aaKnown RBP3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 TCP10Q12799 353 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 KRR1Q13601 381 aaKnown RBP3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 RAB31Q13636 194 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 QPRTQ15274 297 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 MPPED2Q15777 294 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 ACSM3Q53FZ2 586 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 TIMM23BQ5SRD1 257 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 APOBEC3HQ6NTF7 200 aaKnown RBP3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 CALHM1Q8IU99 346 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR5L1Q8NGL2 311 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR10G4Q8NGN3 311 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 RNASEH2CQ8TDP1 164 aaKnown RBP3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 DOK4Q8TEW6 326 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 CASTOR1Q8WTX7 329 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 RNF138Q8WVD3 245 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF681Q96N22 645 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 AGMATQ9BSE5 352 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 DSN1Q9H410 356 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 ASB7Q9H672 318 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 ABCB9Q9NP78 766 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 ISYNA1Q9NPH2 558 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 SDHAF2Q9NX18 166 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 PSG11Q9UQ72 335 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 SCRIBQ14160 1630 aa3.29□□□□□ -1.88
HMGB1P10-201ENST00000395823 DENND4AQ7Z401 1863 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 ASTN1O14525 1302 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 CCDC171Q6TFL3 1326 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 PCDH11XQ9BZA7 1347 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 WI2-2373I1.2A0A1W2PRP0 233 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF729A6NN14 1252 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 C11orf94C9JXX5 98 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 KCNK1O00180 336 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 KPNA3O00505 521 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 PFDN6O15212 129 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 BIRC5O15392 142 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 CRXO43186 299 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 ALOX12BO75342 701 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 RP2O75695 350 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 TRAPPC6AO75865 159 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 DCTN3O75935 186 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 SNAP29O95721 258 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 IFNA16P05015 189 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 TLX1NBP0CAT3 122 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 C8orf88P0DMB2 117 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 PVALBP20472 110 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 HERVK_113P61574 105 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 RHOAP61586 193 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 LSM6P62312 80 aaKnown RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 FAM3AP98173 230 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 TFAMQ00059 246 aaKnown RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 TAL2Q16559 108 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 BRMS1LQ5PSV4 323 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 CYB5R2Q6BCY4 276 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 NIPAL1Q6NVV3 410 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 CBR4Q8N4T8 237 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 C2orf73Q8N5S3 287 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 C15orf56Q8N910 161 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 DUSP18Q8NEJ0 188 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 PXT1Q8NFP0 134 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR51D1Q8NGF3 324 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZFP90Q8TF47 636 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 RASSF5Q8WWW0 418 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 OR8D1Q8WZ84 308 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 BORCS5Q969J3 196 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 YIPF6Q96EC8 236 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 TCEAL4Q96EI5 215 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 WDR34Q96EX3 536 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 ZNF799Q96GE5 643 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 FAM210BQ96KR6 192 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 DDA1Q9BW61 102 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 CALN1Q9BXU9 219 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 CHRNA10Q9GZZ6 450 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 SPNS1Q9H2V7 528 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 EDA2RQ9HAV5 297 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 FBXO8Q9NRD0 319 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 FBXO6Q9NRD1 293 aaPredicted RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 FARSAQ9Y285 508 aaKnown RBP3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 UBIAD1Q9Y5Z9 338 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 MTCH2Q9Y6C9 303 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 SNAPC4Q5SXM2 1469 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 MRC2Q9UBG0 1479 aa3.28□□□□□ -1.88
HMGB1P10-201ENST00000395823 IGLV11-55A0A075B6I3 123 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 A0A0A6YYD5 115 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 TRBV6-6A0A0A6YYG2 114 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms