RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 CCDC159P0C7I6 412 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 ZNF728P0DKX0 622 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 IGHV1-8P0DP01 117 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 RAP2AP10114 183 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 AZGP1P25311 298 aaKnown RBP12.62□□□□□ -0.39
SNCA-205ENST00000394991 MAP2K3P46734 347 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 OR12D2P58182 307 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 OR2T5Q6IEZ7 315 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 MOB3CQ70IA8 216 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 OR4X2Q8NGF9 303 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 OR5A2Q8NGI9 324 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 OR2T29Q8NH02 315 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 SLC7A6OSQ96CW6 309 aaPredicted RBP12.62□□□□□ -0.39
SNCA-205ENST00000394991 CHID1Q9BWS9 393 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 GPR61Q9BZJ8 451 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 OR14J1Q9UGF5 321 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 BAIAP2Q9UQB8 552 aa12.62□□□□□ -0.39
SNCA-205ENST00000394991 EPPK1P58107 5090 aaKnown RBP12.61□□□□□ -0.39
SNCA-205ENST00000394991 KIAA2026Q5HYC2 2103 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 SH2D7A6NKC9 451 aaPredicted RBP12.61□□□□□ -0.39
SNCA-205ENST00000394991 SELENOFO60613 162 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 DNAJC8O75937 253 aaPredicted RBP12.61□□□□□ -0.39
SNCA-205ENST00000394991 IFNGP01579 166 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 LPLP06858 475 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 LYNP07948 512 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 NHLRC4P0CG21 123 aaPredicted RBP12.61□□□□□ -0.39
SNCA-205ENST00000394991 FLOT2Q14254 428 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 NKAPLQ5M9Q1 402 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 MINOS1Q5TGZ0 78 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 PLCXD3Q63HM9 321 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 SPATA24Q86W54 205 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.61□□□□□ -0.39
SNCA-205ENST00000394991 ADGRG5Q8IZF4 528 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 OR2T33Q8NG76 320 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 OTOSQ8NHW6 89 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 CANT1Q8WVQ1 401 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 NRIP2Q9BQI9 281 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 CMC2Q9NRP2 79 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 VNN3Q9NY84 501 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 MINOS1-NBL1R4GNA1 71 aa12.61□□□□□ -0.39
SNCA-205ENST00000394991 AQP12BA6NM10 295 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 RIIAD1A6NNX1 92 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 C3orf84H3BNL1 204 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 J3QT63 122 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 K7N7A8 449 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 GNGT2O14610 69 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 NOS1APO75052 506 aaPredicted RBP12.6□□□□□ -0.39
SNCA-205ENST00000394991 NXPH2O95156 264 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 CST1P01037 141 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 ZNF3P17036 446 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 CD24P25063 80 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 ACTA2P62736 377 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 ACTG2P63267 376 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 ACTC1P68032 377 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 ACTA1P68133 377 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 BNIP1Q12981 228 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 DCTN2Q13561 401 aaKnown RBP12.6□□□□□ -0.39
SNCA-205ENST00000394991 MICAQ29983 383 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 ABCA11PQ4W5N1 156 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 C16orf82Q7Z2V1 217 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 AQP12AQ8IXF9 295 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 AQP11Q8NBQ7 271 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 THEM6Q8WUY1 208 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 NIPAL2Q9H841 368 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 HES4Q9HCC6 221 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 BIRC6Q9NR09 4857 aa12.6□□□□□ -0.39
SNCA-205ENST00000394991 IGHV2-26A0A0B4J1V2 119 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 A0A0U1RQV5 110 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 H0YHG0 523 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 GSC2O15499 205 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 ZNF737O75373 536 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 AMY1AP04745 511 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 AMY2AP04746 511 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 HAAOP46952 286 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 THBS3P49746 956 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 C18orf65Q6ZTR6 163 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 IQCF1Q8N6M8 205 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 OTULINQ96BN8 352 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 ZNF649Q9BS31 505 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 CADM1Q9BY67 442 aaKnown RBP12.59□□□□□ -0.39
SNCA-205ENST00000394991 LIN7BQ9HAP6 207 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 POMPQ9Y244 141 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 PCDHGB5Q9Y5G0 923 aa12.59□□□□□ -0.39
SNCA-205ENST00000394991 HUWE1Q7Z6Z7 4374 aaKnown RBP12.58□□□□□ -0.39
SNCA-205ENST00000394991 IGLV3-1P01715 115 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 EDDM3BP56851 147 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 RIPPLY1Q0D2K3 151 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 ZNF454Q8N9F8 522 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 ASCC1Q8N9N2 400 aaKnown RBP12.58□□□□□ -0.4
SNCA-205ENST00000394991 OR10G2Q8NGC3 310 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 ZNF714Q96N38 554 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 SLC25A33Q9BSK2 321 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 OR51V1Q9H2C8 321 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 FAM206AQ9NX38 181 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.58□□□□□ -0.4
SNCA-205ENST00000394991 SLC22A13Q9Y226 551 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 SESN1Q9Y6P5 492 aa12.58□□□□□ -0.4
SNCA-205ENST00000394991 RASSF2P50749 326 aa12.57□□□□□ -0.4
SNCA-205ENST00000394991 ERVK11-1P61568 191 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms