RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 POLDIP2Q9Y2S7 368 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 HILPDAQ9Y5L2 63 aa16.97■□□□□ 0.31
TRAF4-203ENST00000394925 K7N7A8 449 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 SNX3O60493 162 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 IGLV3-1P01715 115 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 VSIG8P0DPA2 414 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 DYNLT3P51808 116 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 SLC35D3Q5M8T2 416 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 KCTD18Q6PI47 426 aaPredicted RBP16.96■□□□□ 0.31
TRAF4-203ENST00000394925 DEGS2Q6QHC5 323 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 ASRGL1Q7L266 308 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 ASCC1Q8N9N2 400 aaKnown RBP16.96■□□□□ 0.31
TRAF4-203ENST00000394925 MROQ9BYG7 248 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 GPR173Q9NS66 373 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 NDE1Q9NXR1 346 aa16.96■□□□□ 0.31
TRAF4-203ENST00000394925 DNAH9Q9NYC9 4486 aa16.96■□□□□ 0.3
TRAF4-203ENST00000394925 DHRS3O75911 302 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 PF4P02776 101 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 IGHV1-8P0DP01 117 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 EDDM3BP56851 147 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 COL10A1Q03692 680 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 SLC34A1Q06495 639 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 FAM98BQ52LJ0 330 aaKnown RBP16.95■□□□□ 0.3
TRAF4-203ENST00000394925 CCDC121Q6ZUS5 278 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 TTTY10Q9BZA0 68 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 YIPF3Q9GZM5 350 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 HES4Q9HCC6 221 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 SLC22A13Q9Y226 551 aa16.95■□□□□ 0.3
TRAF4-203ENST00000394925 WI2-2373I1.2A0A1W2PRP0 233 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 PQLC2LA1A4F0 135 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 RBP4P02753 201 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 HMGN1P05114 100 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 SLC2A5P22732 501 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 ESRRGP62508 458 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 SLC35A2P78381 396 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 APOFQ13790 326 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 CLVS2Q5SYC1 327 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 CENPVQ7Z7K6 275 aaPredicted RBP16.94■□□□□ 0.3
TRAF4-203ENST00000394925 DHFR2Q86XF0 187 aa16.94■□□□□ 0.3
TRAF4-203ENST00000394925 NUFIP1Q9UHK0 495 aaKnown RBP16.94■□□□□ 0.3
TRAF4-203ENST00000394925 TCRBV4S1A1TA0A5B7 111 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 PRR32B1ATL7 298 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 MRPL3P09001 348 aaKnown RBP16.93■□□□□ 0.3
TRAF4-203ENST00000394925 KRTAP10-11P60412 298 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 ACTA2P62736 377 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 ACTG2P63267 376 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 ACTC1P68032 377 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 ACTA1P68133 377 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 MFGE8Q08431 387 aaPredicted RBP16.93■□□□□ 0.3
TRAF4-203ENST00000394925 ZNF829Q3KNS6 432 aaPredicted RBP16.93■□□□□ 0.3
TRAF4-203ENST00000394925 TCTEX1D4Q5JR98 221 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 GDPD3Q7L5L3 318 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 ANGPTL5Q86XS5 388 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 NDNFQ8TB73 568 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 GTF2A1LQ9UNN4 478 aa16.93■□□□□ 0.3
TRAF4-203ENST00000394925 A6NIN4 97 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 ZNF254O75437 659 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 TTRP02766 147 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 MPZP25189 248 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 RIDAP52758 137 aaKnown RBP16.92■□□□□ 0.3
TRAF4-203ENST00000394925 ERVK11-1P61568 191 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 CDK5Q00535 292 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 MINOS1Q5TGZ0 78 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 LCN1P1Q5VSP4 162 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 TMEM42Q69YG0 159 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 ZNF679Q8IYX0 411 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 RCC1LQ96I51 464 aaKnown RBP16.92■□□□□ 0.3
TRAF4-203ENST00000394925 ZNF714Q96N38 554 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 IKZF2Q9UKS7 526 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 COPS3Q9UNS2 423 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 TSSC4Q9Y5U2 329 aaPredicted RBP16.92■□□□□ 0.3
TRAF4-203ENST00000394925 MINOS1-NBL1R4GNA1 71 aa16.92■□□□□ 0.3
TRAF4-203ENST00000394925 ARRDC5A6NEK1 342 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 FAM90A22PA8MWA6 464 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 H3BUI4 141 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 DLGAP1O14490 977 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 ZNF737O75373 536 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 CST1P01037 141 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 CHRM2P08172 466 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 AZGP1P25311 298 aaKnown RBP16.91■□□□□ 0.3
TRAF4-203ENST00000394925 ROM1Q03395 351 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 GK3PQ14409 553 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 TMEM236Q5W0B7 351 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 TCF23Q7RTU1 214 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 TMEM179BQ7Z7N9 219 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 MYDGFQ969H8 173 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 MED4Q9NPJ6 270 aa16.91■□□□□ 0.3
TRAF4-203ENST00000394925 OSMP13725 252 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 MS4A2Q01362 244 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 EDDM3AQ14507 147 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 OR8H2Q8N162 312 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 ZNF676Q8N7Q3 588 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 TRMT10AQ8TBZ6 339 aaKnown RBP16.9■□□□□ 0.3
TRAF4-203ENST00000394925 ASB17Q8WXJ9 295 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 INPP5EQ9NRR6 644 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.9■□□□□ 0.32e-9■■■■■ 40.4
TRAF4-203ENST00000394925 SESN1Q9Y6P5 492 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 V9GYS6 101 aa16.9■□□□□ 0.3
TRAF4-203ENST00000394925 IGHV2-26A0A0B4J1V2 119 aa16.89■□□□□ 0.29
TRAF4-203ENST00000394925 LOC110117498-PIK3R3F6TDL0 507 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms