RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 SLAMF9Q96A28 289 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 RBFOX1Q9NWB1 397 aaKnown RBP17.29■□□□□ 0.36
HDDC3-202ENST00000394272 KCNK7Q9Y2U2 307 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 CACNG2Q9Y698 323 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 ANKRD20A5PA0PJZ0 165 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 LRP5LA4QPB2 252 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 MFNGO00587 321 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 AKR7A2O43488 359 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 GSTP1P09211 210 aaKnown RBP17.29■□□□□ 0.36
HDDC3-202ENST00000394272 BCL3P20749 454 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 TFF3Q07654 80 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 IL24Q13007 206 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 DYRK1AQ13627 763 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 VHLLQ6RSH7 139 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 CCBE1Q6UXH8 406 aaPredicted RBP17.29■□□□□ 0.36
HDDC3-202ENST00000394272 OR10AD1Q8NGE0 317 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 OR13G1Q8NGZ3 307 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 LRRC46Q96FV0 321 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 ARHGAP5-AS1Q96IT6 56 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 NEDD4LQ96PU5 975 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 KCNJ16Q9NPI9 418 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.29■□□□□ 0.36
HDDC3-202ENST00000394272 DUSP13Q9UII6 198 aa17.29■□□□□ 0.36
HDDC3-202ENST00000394272 TMEM210A6NLX4 147 aa17.28■□□□□ 0.36
HDDC3-202ENST00000394272 J3QT63 122 aa17.28■□□□□ 0.36
HDDC3-202ENST00000394272 RBBP9O75884 186 aa17.28■□□□□ 0.36
HDDC3-202ENST00000394272 ECDO95905 644 aaPredicted RBP17.28■□□□□ 0.36
HDDC3-202ENST00000394272 BLVRBP30043 206 aaPredicted RBP17.28■□□□□ 0.36
HDDC3-202ENST00000394272 KLF3P57682 345 aaPredicted RBP17.28■□□□□ 0.36
HDDC3-202ENST00000394272 SSBP1Q04837 148 aaKnown RBP17.28■□□□□ 0.36
HDDC3-202ENST00000394272 ZNF154Q13106 437 aa17.28■□□□□ 0.36
HDDC3-202ENST00000394272 MZT2BQ6NZ67 158 aa17.28■□□□□ 0.36
HDDC3-202ENST00000394272 FBXL14Q8N1E6 418 aa17.28■□□□□ 0.36
HDDC3-202ENST00000394272 MSL2Q9HCI7 577 aa17.28■□□□□ 0.36
HDDC3-202ENST00000394272 ANKHD1Q8IWZ3 2542 aaKnown RBP17.28■□□□□ 0.36
HDDC3-202ENST00000394272 EPG5Q9HCE0 2579 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 F8VVB4 439 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 F8VWA3 439 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 CYB5AP00167 134 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 GABRR1P24046 479 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 SNTB1Q13884 538 aaKnown RBP17.27■□□□□ 0.36
HDDC3-202ENST00000394272 DAZAP2Q15038 168 aaPredicted RBP17.27■□□□□ 0.36
HDDC3-202ENST00000394272 TAF9Q16594 264 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 PIGYQ3MUY2 71 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 SIGIRRQ6IA17 410 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 CYYR1Q96J86 154 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 C7orf50Q9BRJ6 194 aaKnown RBP17.27■□□□□ 0.36
HDDC3-202ENST00000394272 CA10Q9NS85 328 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 NDRG3Q9UGV2 375 aa17.27■□□□□ 0.36
HDDC3-202ENST00000394272 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.27■□□□□ 0.35
HDDC3-202ENST00000394272 BTCP35070 178 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 KIR2DL3P43628 341 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 AP3S2P59780 193 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 NCMAPQ5T1S8 102 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 OLFML2AQ68BL7 652 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 SLC22A25Q6T423 547 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 SPERTQ8NA61 448 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 SCCPDHQ8NBX0 429 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 POM121Q96HA1 1249 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 SYT3Q9BQG1 590 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 MRPL37Q9BZE1 423 aaKnown RBP17.27■□□□□ 0.35
HDDC3-202ENST00000394272 CXXC4Q9H2H0 198 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 ST3GAL6Q9Y274 331 aa17.27■□□□□ 0.35
HDDC3-202ENST00000394272 SPTBN1Q01082 2364 aaKnown RBP17.26■□□□□ 0.35
HDDC3-202ENST00000394272 ZFYVE26Q68DK2 2539 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 MEIS3P1A6NDR6 274 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 TRAPPC2LH3BP13 241 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 GEMIN2O14893 280 aaKnown RBP17.26■□□□□ 0.35
HDDC3-202ENST00000394272 RHBDL1O75783 438 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 GSTT2BP0CG30 244 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 RBM11P57052 281 aaKnown RBP17.26■□□□□ 0.35
HDDC3-202ENST00000394272 FGF12P61328 243 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 MAB21L1Q13394 359 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 PNLIPRP3Q17RR3 467 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 NHLRC3Q5JS37 347 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 BATF2Q8N1L9 274 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 LINC01560Q8TB33 94 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 ST8SIA4Q92187 359 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 MRPL24Q96A35 216 aaKnown RBP17.26■□□□□ 0.35
HDDC3-202ENST00000394272 PECRQ9BY49 303 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 ESRP2Q9H6T0 727 aaKnown RBP17.26■□□□□ 0.35
HDDC3-202ENST00000394272 ZNF442Q9H7R0 627 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 NKIRAS2Q9NYR9 191 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 TAS2R8Q9NYW2 309 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 ROS1P08922 2347 aa17.26■□□□□ 0.35
HDDC3-202ENST00000394272 F5H5P2 479 aa17.25■□□□□ 0.35
HDDC3-202ENST00000394272 SLC6A1P30531 599 aa17.25■□□□□ 0.35
HDDC3-202ENST00000394272 PCGF3Q3KNV8 242 aa17.25■□□□□ 0.35
HDDC3-202ENST00000394272 DUSP18Q8NEJ0 188 aa17.25■□□□□ 0.35
HDDC3-202ENST00000394272 NUDCD2Q8WVJ2 157 aa17.25■□□□□ 0.35
HDDC3-202ENST00000394272 BBC3Q96PG8 261 aaPredicted RBP17.25■□□□□ 0.35
HDDC3-202ENST00000394272 HS3ST6Q96QI5 342 aa17.25■□□□□ 0.35
HDDC3-202ENST00000394272 ZNF581Q9P0T4 197 aa17.25■□□□□ 0.35
HDDC3-202ENST00000394272 CHD3Q12873 2000 aaKnown RBP17.25■□□□□ 0.35
HDDC3-202ENST00000394272 hCG_2014768A0A024R1R8 64 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 SSX5O60225 188 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 ACTBP60709 375 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 ACTG1P63261 375 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 ARL6IP1Q15041 203 aa17.24■□□□□ 0.35
HDDC3-202ENST00000394272 ENKURQ8TC29 256 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms