RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 MARS2Q96GW9 593 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-205ENST00000394084 REEP6Q96HR9 211 aa12.15□□□□□ -0.46
GAPVD1-205ENST00000394084 PTRH2Q9Y3E5 179 aaKnown RBP12.15□□□□□ -0.46
GAPVD1-205ENST00000394084 ZNF98A6NK75 572 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 NME2P1O60361 137 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 FCGR3AP08637 254 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 EPHA8P29322 1005 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 ZNF84P51523 738 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 ARL6IP1Q15041 203 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 PIGYQ3MUY2 71 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 SHEQ5VZ18 495 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 ZIC4Q8N9L1 334 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 AKR7LQ8NHP1 331 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 SRXN1Q9BYN0 137 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 MEX3AA1L020 520 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 SGCEO43556 437 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 ZIC3O60481 467 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 ZNF728P0DKX0 622 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 OTX1P32242 354 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 ZNF133P52736 654 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 PEA15Q15121 130 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 AVPI1Q5T686 147 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 PLXDC2Q6UX71 529 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 LYZL2Q7Z4W2 148 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 SPEM1Q8N4L4 309 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 OR5L1Q8NGL2 311 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 KIRREL1Q96J84 757 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 KLF2Q9Y5W3 355 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 MBPP02686 304 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 LIFP15018 202 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 F2RL1P55085 397 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 ZNF616Q08AN1 781 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 TMEM156Q8N614 296 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 MR1Q95460 341 aa12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 NAA11Q9BSU3 229 aaPredicted RBP12.14□□□□□ -0.47
GAPVD1-205ENST00000394084 A0A1B0GV50 99 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 EIF1BO60739 113 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 JTBO76095 146 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 SLC22A25Q6T423 547 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 HIST2H3AQ71DI3 136 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 OR11L1Q8NGX0 322 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 GLYATL2Q8WU03 294 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 RTN4IP1Q8WWV3 396 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 ALKBH3Q96Q83 286 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 C12orf57Q99622 126 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 PROK2Q9HC23 129 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 SHANK1Q9Y566 2161 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 RRP8O43159 456 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 CD5P06127 495 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 B4GALT1P15291 398 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 FHITP49789 147 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 NOVA1P51513 510 aaKnown RBP12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 RTL6Q6ICC9 239 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 OPN5Q6U736 354 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 BORCS8Q96FH0 119 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 UBE2ZQ9H832 354 aaPredicted RBP12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 CRLF2Q9HC73 371 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 BIN3Q9NQY0 253 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 PARP11Q9NR21 331 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 NECAP2Q9NVZ3 263 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 TUBD1Q9UJT1 453 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 KCNIP3Q9Y2W7 256 aa12.13□□□□□ -0.47
GAPVD1-205ENST00000394084 C1QL1O75973 258 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 FKBP2P26885 142 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 HOXA1P49639 335 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 ZNF468Q5VIY5 522 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 FOXL2NBQ6ZUU3 175 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 YRDCQ86U90 279 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 FOXD3Q9UJU5 478 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 A0A087WZY1 265 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 CCDC187A0A096LP49 1063 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 ZNHIT1O43257 154 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 CA11O75493 328 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 VAMP5O95183 116 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 TSPAN15O95858 294 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 UMODP07911 640 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 NTF4P34130 210 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 ASCL1P50553 236 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 DSCR4P56555 118 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 EIF3IQ13347 325 aaKnown RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 PPA1Q15181 289 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 MIDNQ504T8 468 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 FBXL14Q8N1E6 418 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 C14orf79Q96F83 325 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 NAA60Q9H7X0 242 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 WFDC1Q9HC57 220 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 IGHV1-45A0A0A0MS14 117 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 IGKV1-12A0A0C4DH73 117 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 IGKV1D-12P01611 117 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 APOC1P02654 83 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 ECI1P42126 302 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 CXCL12P48061 93 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 DVL1P1P54792 670 aaPredicted RBP12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 TMEM187Q14656 261 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 FAM27BQ5VT28 67 aa12.12□□□□□ -0.47
GAPVD1-205ENST00000394084 CLCC1Q96S66 551 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms