RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 NT5CQ8TCD5 201 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TMEM234Q8WY98 164 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SMIM10Q96HG1 83 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 C17orf77Q96MU5 243 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SLC29A3Q9BZD2 475 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 COA4Q9NYJ1 87 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 MYRFQ9Y2G1 1151 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TIMM8BQ9Y5J9 83 aaPredicted RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 SLC22A7Q9Y694 548 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 RREB1Q92766 1687 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 COL16A1Q07092 1604 aaPredicted RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 IGHV4OR15-8A0A075B7B6 117 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 A0A0B4J2A0 478 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 I3L521 148 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TAAR5O14804 337 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 MPZL1O95297 269 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 FUT3P21217 361 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 RND2P52198 227 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 EMP1P54849 157 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 DYNLT1P63172 113 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TGIF1Q15583 401 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 UBE2NLQ5JXB2 153 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 HES3Q5TGS1 186 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 REG3GQ6UW15 175 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 Q6ZSR6 202 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SLC22A18ASQ8N1D0 253 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR51Q1Q8NH59 317 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OVOL2Q9BRP0 275 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TMEM109Q9BVC6 243 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SLIRPQ9GZT3 109 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 SHPKQ9UHJ6 478 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 PKIGQ9Y2B9 76 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 CCDC141Q6ZP82 1450 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ADGRB2O60241 1585 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 A0A0G2JMP0 313 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 FAM220BPB1ANY3 271 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 EIF1BO60739 113 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 BANF1O75531 89 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ZFP36P26651 326 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 CCKARP32238 428 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 CEACAM6P40199 344 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 EIF1P41567 113 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 DLX1P56177 255 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 UNC119Q13432 240 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 SHHQ15465 462 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 MLF2Q15773 248 aaPredicted RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 NEDD8Q15843 81 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR10K2Q6IF99 312 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ZNF561Q8N587 486 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 OR4M2Q8NGB6 313 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ZNF519Q8TB69 540 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 TCEAL4Q96EI5 215 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 MED18Q9BUE0 208 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 MED28Q9H204 178 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 EXOSC3Q9NQT5 275 aaKnown RBP2.98□□□□□ -1.93
XRN1-202ENST00000392981 ANXA10Q9UJ72 324 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 MMACHCQ9Y4U1 282 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 ZNF780BQ9Y6R6 833 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 CDC42BPGQ6DT37 1551 aa2.98□□□□□ -1.93
XRN1-202ENST00000392981 A0A087X0T9 212 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 OR6C6A6NF89 314 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 RBFOX3A6NFN3 312 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 C21orf140B9A014 251 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 NADKO95544 446 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 CSF3P09919 207 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 CD79AP11912 226 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 CD59P13987 128 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 LIFP15018 202 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SPINK2P20155 84 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 CERS1P27544 350 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SLC18A1P54219 525 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 LSM6P62312 80 aaKnown RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 ATP6AP1Q15904 470 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 TTLL9Q3SXZ7 439 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 LYRM7Q5U5X0 104 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SAMD13Q5VXD3 122 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZNF439Q8NDP4 499 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 NUP37Q8NFH4 326 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 YIPF6Q96EC8 236 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 C20orf144Q9BQM9 153 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ARV1Q9H2C2 271 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 ZDHHC4Q9NPG8 344 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 TAS2R1Q9NYW7 299 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SLC25A15Q9Y619 301 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 PHLPP1O60346 1717 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 MAP2P11137 1827 aaKnown RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 NDUFC2-KCTD14E9PQ53 114 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 CLDN34H7C241 214 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 TYROBPO43914 113 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 HPRT1P00492 218 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 LALBAP00709 142 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 SMIM6P0DI80 62 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 PSG1P11464 419 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 HIST1H1CP16403 213 aaKnown RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 GADD45AP24522 165 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 FOXG1P55316 489 aaPredicted RBP2.97□□□□□ -1.93
XRN1-202ENST00000392981 ERVPABLB-1P60509 514 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 TIMM10P62072 90 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 DEFA6Q01524 100 aa2.97□□□□□ -1.93
XRN1-202ENST00000392981 DNAJC24Q6P3W2 148 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms