RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 CABIN1Q9Y6J0 2220 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 TRBV5-7A0A0A0MS05 114 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 CD8AP01732 235 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 EDN3P14138 238 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 MSX1P28360 303 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 NHLH2Q02577 135 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 MGAT2Q10469 447 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 ZNF385CQ66K41 422 aaPredicted RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 ZNF439Q8NDP4 499 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 ADAT3Q96EY9 351 aaPredicted RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 WDR13Q9H1Z4 485 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 TRAPPC2LQ9UL33 140 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 DMRT1Q9Y5R6 373 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 HS3ST1O14792 307 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 PTBP3O95758 552 aaKnown RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 DDTP30046 118 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 PARD6AQ9NPB6 346 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 ELOA3CA0A087WX78 387 aaPredicted RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 A0A1W2PNV4 684 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 H3BMH7 237 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 TMEM267Q0VDI3 215 aaPredicted RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 ENDOGQ14249 297 aaKnown RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 MPV17LQ2QL34 196 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 FBXL14Q8N1E6 418 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 MENTQ9BUN1 341 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 CARHSP1Q9Y2V2 147 aaKnown RBP12.63□□□□□ -0.39
RTF1-201ENST00000389629 SLCO1B1Q9Y6L6 691 aa12.63□□□□□ -0.39
RTF1-201ENST00000389629 WDR1O75083 606 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 MSR1P21757 451 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 DEGS2Q6QHC5 323 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 IL22RA2Q969J5 263 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 SLC26A1Q9H2B4 701 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 NAA60Q9H7X0 242 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 METTL1Q9UBP6 276 aaKnown RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 ADAM20O43506 726 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 EIF1BO60739 113 aaKnown RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 CD74P04233 296 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 ASAH2BP0C7U1 165 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 HLA-DOBP13765 273 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 EIF1P41567 113 aaKnown RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 PLGLB1Q02325 96 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 MSMO1Q15800 293 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 ZNF880Q6PDB4 577 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 LMAN1LQ9HAT1 526 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 LOC102725191A0A1B0GVB3 256 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 M0R143 59 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 IGHV3-9P01782 118 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 CST2P09228 141 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 LTC4SQ16873 150 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 ZNF107Q9UII5 783 aaPredicted RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 TP53TG5Q9Y2B4 290 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 ALG1L2C9J202 215 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 G3V3Q6 166 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 SOX15O60248 233 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 NTF3P20783 257 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 KRTDAPP60985 99 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 INSM1Q01101 510 aaPredicted RBP12.62□□□□□ -0.39
RTF1-201ENST00000389629 RDH5Q92781 318 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 PPP1R3CQ9UQK1 317 aa12.62□□□□□ -0.39
RTF1-201ENST00000389629 IGHV5-51A0A0C4DH38 117 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 P04436 131 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 UBE2G2P60604 165 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 ECH1Q13011 328 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 ANKRD55Q3KP44 614 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 LANCL3Q6ZV70 420 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 CYB561D1Q8N8Q1 229 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 NDUFS6O75380 124 aaKnown RBP12.61□□□□□ -0.39
RTF1-201ENST00000389629 KITLGP21583 273 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 ZNF90Q03938 601 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 FUT7Q11130 342 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 ZNF574Q6ZN55 896 aaPredicted RBP12.61□□□□□ -0.39
RTF1-201ENST00000389629 ADAMTS17Q8TE56 1095 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 MS4A10Q96PG2 267 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 VPS25Q9BRG1 176 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 ZDHHC11Q9H8X9 412 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 A0A1W2PR80 420 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 CBY3A6NI87 242 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 H0YL77 283 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 SCRG1O75711 98 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 GALR1P47211 349 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 LY6G6FQ5SQ64 297 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 OR2I1PQ8NGU4 316 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 C8orf44Q96CB5 159 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 DVL1O14640 695 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 BGLAPP02818 100 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 BMP5P22003 454 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 IL2RGP31785 369 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 CHRNA7P36544 502 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 ZNF260Q3ZCT1 412 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 ZNF100Q8IYN0 542 aa12.61□□□□□ -0.39
RTF1-201ENST00000389629 GPX7Q96SL4 187 aaPredicted RBP12.61□□□□□ -0.39
RTF1-201ENST00000389629 VWA8A3KMH1 1905 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 IGHV3-15A0A0B4J1V0 119 aa12.6□□□□□ -0.39
RTF1-201ENST00000389629 MGST1P10620 155 aaKnown RBP12.6□□□□□ -0.39
RTF1-201ENST00000389629 MMP9P14780 707 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms