RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 RAB20Q9NX57 234 aa0.64□□□□□ -2.31
RNU6-541P-201ENST00000384709 TBC1D24Q9ULP9 559 aa0.64□□□□□ -2.31
RNU6-541P-201ENST00000384709 TFR2Q9UP52 801 aa0.64□□□□□ -2.31
RNU6-541P-201ENST00000384709 TRAPPC1Q9Y5R8 145 aa0.64□□□□□ -2.31
RNU6-541P-201ENST00000384709 NSD2O96028 1365 aa0.64□□□□□ -2.31
RNU6-541P-201ENST00000384709 SBNO1A3KN83 1393 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 TRAV25A0A0B4J276 109 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 IGHV2OR16-5A0A0B4J2B6 119 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 ZNF701M0R085 212 aaPredicted RBP0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 S1PR2O95136 353 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 KRT16P08779 473 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 UBCP0CG48 685 aaKnown RBP0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 HLA-GP17693 338 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 GNRHRP30968 328 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 SLC1A2P43004 574 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 LGALS7P47929 136 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 NUDT2P50583 147 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 CLDN6P56747 220 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 SLC35A1P78382 337 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 IRF8Q02556 426 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 DNAJC3Q13217 504 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 KLHL40Q2TBA0 621 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 FAM231DQ6ZW35 169 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 ITPRIPQ8IWB1 547 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 AMN1Q8IY45 258 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 OR5H2Q8NGV7 314 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 TNFRSF14Q92956 283 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 ISG20Q96AZ6 181 aaKnown RBP0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 SLC25A44Q96H78 314 aaPredicted RBP0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 TRIB3Q96RU7 358 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 C11orf70Q9BRQ4 267 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 TSGA10Q9BZW7 698 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 FAM192AQ9GZU8 254 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 PRSS16Q9NQE7 514 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 MYEF2Q9P2K5 600 aaKnown RBP0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 KLF13Q9Y2Y9 288 aaPredicted RBP0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 FADS3Q9Y5Q0 445 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 ICOSQ9Y6W8 199 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 HEATR5BQ9P2D3 2071 aa0.63□□□□□ -2.31
RNU6-541P-201ENST00000384709 CHD2O14647 1828 aaKnown RBP0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 IGKV1D-37A0A075B6S9 117 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 IGHV3-21A0A0B4J1V1 117 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 TRAV8-4A0A0B4J246 113 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 LRRIQ4A6NIV6 560 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ZNF729A6NN14 1252 aaPredicted RBP0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 A8MWP4 228 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ZNF99A8MXY4 864 aaPredicted RBP0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 HACD1B0YJ81 288 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 J3QT63 122 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 NDUFS5O43920 106 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 MPDU1O75352 247 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 P01737 135 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 HLA-AP01891 365 aaKnown RBP0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ARL14EPLP0DKL9 152 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 PAX6P26367 422 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 GPR1P46091 355 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 C2orf54Q08AI8 447 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ELOCQ15369 112 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 TOMM34Q15785 309 aaPredicted RBP0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 TPRG1LQ5T0D9 272 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ZFP82Q8N141 532 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 KIF2BQ8N4N8 673 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 OR8S1Q8NH09 359 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ZFAND1Q8TCF1 268 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 TMEM234Q8WY98 164 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 NAT6Q93015 286 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 RBPMSQ93062 196 aaKnown RBP0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 PYURFQ96I23 114 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 BPIFA3Q9BQP9 254 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 EXO5Q9H790 373 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 TMEM100Q9NV29 134 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 PRO0628Q9UI54 55 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ACOT9Q9Y305 439 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 ENPP4Q9Y6X5 453 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 FREM1Q5H8C1 2179 aa0.62□□□□□ -2.31
RNU6-541P-201ENST00000384709 MYOFQ9NZM1 2061 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 ARAP3Q8WWN8 1544 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 G3V3Q6 166 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 CXorf1O96002 111 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 TRGV3P03979 118 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 OPN1SWP03999 348 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 CGB3P0DN86 165 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 CGB7P0DN87 165 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 PRPS1L1P21108 318 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 CD82P27701 267 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 HTR2BP41595 481 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 SLC18A1P54219 525 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 CUL2Q13617 745 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 IL18Q14116 193 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 EIF3MQ7L2H7 374 aaKnown RBP0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 MICU2Q8IYU8 434 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 INO80EQ8NBZ0 244 aaPredicted RBP0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 OR4K2Q8NGD2 314 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 BAALCQ8WXS3 180 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 TXNIPQ9H3M7 391 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 KIR3DX1Q9H7L2 352 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 CYP3A43Q9HB55 503 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 TAC3Q9UHF0 121 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 KLF12Q9Y4X4 402 aa0.61□□□□□ -2.31
RNU6-541P-201ENST00000384709 MALRD1Q5VYJ5 2156 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms