RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 LDHCP07864 332 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ABHD2P08910 425 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 IQCF3P0C7M6 154 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR56A5P0C7T3 313 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 STAG3L1P0CL83 205 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 MYBL1P10243 752 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 GHRP10912 638 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ABOP16442 354 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 AHCYP23526 432 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR1D2P34982 312 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 POLR2IP36954 125 aaKnown RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 PSMB10P40306 273 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ASMTP46597 345 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 IFNAR2P48551 515 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 HSPA13P48723 471 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 STAT2P52630 851 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 RGS8P57771 180 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 OSTNP61366 133 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPS6P62753 249 aaKnown RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 SEMG2Q02383 582 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 IRF8Q02556 426 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 PJVKQ0ZLH3 352 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ST3GAL3Q11203 375 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 PPP1R1AQ13522 171 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ATP6AP1Q15904 470 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 UAP1Q16222 522 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 USH1GQ495M9 461 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CYBRD1Q53TN4 286 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACTBL2Q562R1 376 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 MESTQ5EB52 335 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDKL4Q5MAI5 379 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 TIGD3Q6B0B8 471 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 DHRS7BQ6IAN0 325 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 EBLN2Q6P2I7 272 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 LINC00299Q6ZSB3 139 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 Q6ZSR3 168 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 Q6ZUT4 128 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 TCF23Q7RTU1 214 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 MSRB3Q8IXL7 192 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CYP4Z2PQ8N1L4 340 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 TTC9CQ8N5M4 171 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 C5orf17Q8NAS9 161 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 GPR32P1Q8NGA4 272 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR51H1Q8NH63 302 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDKL2Q92772 493 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CIDECQ96AQ7 238 aaPredicted RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 BTN2A3PQ96KV6 586 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 AMDHD1Q96NU7 426 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 TSPAN18Q96SJ8 248 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 PAGR1Q9BTK6 254 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF426Q9BUY5 554 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 GGTLC1Q9BX51 225 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 MAGT1Q9H0U3 335 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 SYT4Q9H2B2 425 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 OSGEPL1Q9H4B0 414 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF385DQ9H6B1 395 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 RDH14Q9HBH5 336 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ABCB9Q9NP78 766 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 EXOSC4Q9NPD3 245 aaKnown RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CENPMQ9NSP4 180 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 RBFOX1Q9NWB1 397 aaKnown RBP-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 DNAJB9Q9UBS3 223 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 KCNK6Q9Y257 313 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ASF1AQ9Y294 204 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 RNF11Q9Y3C5 154 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 ENPP4Q9Y6X5 453 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 MYH3P11055 1940 aa-1.81□□□□□ -2.7
RNU6-540P-201ENST00000384622 CUX2O14529 1486 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ECM29Q5VYK3 1845 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 PKD1L3Q7Z443 1732 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 NALCNQ8IZF0 1738 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 MROH5Q6ZUA9 1318 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF644Q9H582 1327 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRAV18A0A075B6X5 111 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCL15-CCL14A0A0B4J2E2 113 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGHV7-4-1A0A0J9YVY3 117 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 LRP5LA4QPB2 252 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRIM64A6NGJ6 449 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 SEC14L6B5MCN3 397 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMEM150CB9EJG8 249 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 L7N2F9 121 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 M0QXV9 152 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 XPO1O14980 1071 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACOX3O15254 700 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 NVLO15381 856 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCL25O15444 150 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TCF21O43680 179 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 LANCL1O43813 399 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 PDCD6O75340 191 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 BRI3O95415 125 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 IFNA10P01566 189 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 POLBP06746 335 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CTSLP07711 333 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 LINGO3P0C6S8 592 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCL3L1P16619 93 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDH2P19022 906 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ATP6V1B2P21281 511 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TBXA2RP21731 343 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 HLA-DMAP28067 261 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CMPK1P30085 196 aa-1.82□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms