RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 TMEM9BQ9NQ34 198 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 LOC105371242A0A075B767 164 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 A0A1B0GW64 132 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 K7EP13 123 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 NUDT21O43809 227 aaKnown RBP13.25□□□□□ -0.29
VLDLR-202ENST00000382099 PTGER4P35408 488 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 FBXW12Q6X9E4 464 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 CDC20BQ86Y33 519 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 DTWD2Q8NBA8 298 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 OR13G1Q8NGZ3 307 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 BANF2Q9H503 90 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 DENND4CQ5VZ89 1909 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 CFAP54Q96N23 3096 aa13.25□□□□□ -0.29
VLDLR-202ENST00000382099 MTCL1Q9Y4B5 1905 aaKnown RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 HOXC12P31275 282 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 GABRA3P34903 492 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 HNRNPA3P51991 378 aaKnown RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 RIPPLY3P57055 190 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 RANP62826 216 aaKnown RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 C22orf39Q6P5X5 142 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 MRPL52Q86TS9 123 aaKnown RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 CALHM1Q8IU99 346 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 NPAS4Q8IUM7 802 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 SOCS4Q8WXH5 440 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 THRSPQ92748 146 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 APH1AQ96BI3 265 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 OR8B4Q96RC9 309 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 GPR35Q9HC97 309 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 B3GALT1Q9Y5Z6 326 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 MEGF11A6BM72 1044 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 FAM24AA6NFZ4 105 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 C4orf51C9J302 202 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 GZMHP20718 246 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 GRK6P43250 576 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 MFGE8Q08431 387 aaPredicted RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 PNRC1Q12796 327 aaPredicted RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 IL24Q13007 206 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 RTP5Q14D33 572 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 TMEM41BQ5BJD5 291 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF506Q5JVG8 444 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 LCN15Q6UWW0 184 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 SULF2Q8IWU5 870 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 CMTM8Q8IZV2 173 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 SUMF1Q8NBK3 374 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 TMEM170AQ8WVE7 144 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 FGGYQ96C11 551 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF430Q9H8G1 570 aaPredicted RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 PLSCR2Q9NRY7 297 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 IL19Q9UHD0 177 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 ADAM29Q9UKF5 820 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 OSGIN2Q9Y236 505 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 F5P12259 2224 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 HMGA1P17096 107 aaKnown RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 FGF8P55075 233 aaPredicted RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 TRA2BP62995 288 aaKnown RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 FBLN7Q53RD9 439 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 COA6Q5JTJ3 125 aaKnown RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 ORAOV1Q8WV07 137 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 KLF16Q9BXK1 252 aaPredicted RBP13.24□□□□□ -0.29
VLDLR-202ENST00000382099 TBL1XR1Q9BZK7 514 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 PLA2G3Q9NZ20 509 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 TMEM14AQ9Y6G1 99 aa13.24□□□□□ -0.29
VLDLR-202ENST00000382099 FIGNL2A6NMB9 653 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 CEBPZOSA8MTT3 80 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 MRPS34P82930 218 aaKnown RBP13.23□□□□□ -0.29
VLDLR-202ENST00000382099 ACOT6Q3I5F7 207 aaPredicted RBP13.23□□□□□ -0.29
VLDLR-202ENST00000382099 ZAR1Q86SH2 424 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 ADAMTS18Q8TE60 1221 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 BTF3L4Q96K17 158 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 C20orf144Q9BQM9 153 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF701Q9NV72 531 aaPredicted RBP13.23□□□□□ -0.29
VLDLR-202ENST00000382099 MANSC4A6NHS7 340 aaPredicted RBP13.23□□□□□ -0.29
VLDLR-202ENST00000382099 EMDP50402 254 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 RAB38P57729 211 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 UNC119Q13432 240 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 GNMTQ14749 295 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 GPR157Q5UAW9 335 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 CLDND2Q8NHS1 167 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 EMC9Q9Y3B6 208 aa13.23□□□□□ -0.29
VLDLR-202ENST00000382099 J3QW42 95 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 NUPR1O60356 82 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 LDB3O75112 727 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 REEP5Q00765 189 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 ZP2Q05996 745 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 LRRC25Q8N386 305 aaPredicted RBP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 YIPF1Q9Y548 306 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 SOCS1O15524 211 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 SLC17A1Q14916 467 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 ALG10Q5BKT4 473 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 DMRTC1Q5HYR2 192 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF596Q8TC21 504 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 PTPMT1Q8WUK0 201 aaPredicted RBP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 RPUSD4Q96CM3 377 aaKnown RBP13.22□□□□□ -0.29
VLDLR-202ENST00000382099 RSPRY1Q96DX4 576 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 PCBD2Q9H0N5 130 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 RBKSQ9H477 322 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 PELI2Q9HAT8 420 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 ZNF319Q9P2F9 582 aa13.22□□□□□ -0.29
VLDLR-202ENST00000382099 HHLA2Q9UM44 414 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms