RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 C3AR1Q16581 482 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 C9orf135Q5VTT2 229 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 C6orf201Q7Z4U5 140 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 VASH2Q86V25 355 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 CCDC36Q8IYA8 594 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 FN3KRPQ9HA64 309 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 WDFY3Q8IZQ1 3526 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 TRAV17A0A0B4J275 112 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 J3QW42 95 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 ERVH48-1M5A8F1 160 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 AKR1C4P17516 323 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 CHATP28329 748 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 APLNRP35414 380 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 CCL11P51671 97 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 CLLU1Q5K131 121 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 OR5L1Q8NGL2 311 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 BCL2L2Q92843 193 aaPredicted RBP19.97■□□□□ 0.79
VPS16-201ENST00000380443 WDR89Q96FK6 387 aaPredicted RBP19.97■□□□□ 0.79
VPS16-201ENST00000380443 DHRS9Q9BPW9 319 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 TMEM165Q9HC07 324 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 EHFQ9NZC4 300 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 MYO7BQ6PIF6 2116 aa19.97■□□□□ 0.79
VPS16-201ENST00000380443 NCOR2Q9Y618 2525 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 FXYD6-FXYD2A0A087WZ82 144 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 FOXG1P55316 489 aaPredicted RBP19.96■□□□□ 0.79
VPS16-201ENST00000380443 RAB14P61106 215 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 EXOSC2Q13868 293 aaKnown RBP19.96■□□□□ 0.79
VPS16-201ENST00000380443 RTP5Q14D33 572 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 TMUB2Q71RG4 321 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 ADAD2Q8NCV1 583 aaKnown RBP19.96■□□□□ 0.79
VPS16-201ENST00000380443 OR13G1Q8NGZ3 307 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 OR51F2Q8NH61 342 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 FXYD6Q9H0Q3 95 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 RTTNQ86VV8 2226 aa19.96■□□□□ 0.79
VPS16-201ENST00000380443 PQLC2LA1A4F0 135 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 OR5H14A6NHG9 310 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 DBX1A6NMT0 343 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 ZNF850A8MQ14 1090 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 ARPC5O15511 151 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 VAMP1P23763 118 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 CYCSP99999 105 aaKnown RBP19.95■□□□□ 0.78
VPS16-201ENST00000380443 CLN3Q13286 438 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 TAF9Q16594 264 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 NKAPLQ5M9Q1 402 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 SIGIRRQ6IA17 410 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 C3P1Q6ZMU1 363 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 P4HA3Q7Z4N8 544 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 TMEM200AQ86VY9 491 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 OR8H3Q8N146 312 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 OR56B2PQ8NGI1 322 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 PDCD10Q9BUL8 212 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 C5orf66Q9H5L9 145 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 IGKV1-12A0A0C4DH73 117 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 A0A0D9SG52 128 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 RP2O75695 350 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 SFT2D2O95562 160 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 IGKV1D-12P01611 117 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 CCNOP22674 350 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 SORDQ00796 357 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 RFPL4BQ6ZWI9 263 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 FDCSPQ8NFU4 85 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 CMSS1Q9BQ75 279 aaKnown RBP19.95■□□□□ 0.78
VPS16-201ENST00000380443 ZNF701Q9NV72 531 aaPredicted RBP19.95■□□□□ 0.78
VPS16-201ENST00000380443 PRSS50Q9UI38 385 aa19.95■□□□□ 0.78
VPS16-201ENST00000380443 NPY4RP50391 375 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 ARPC4P59998 168 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 PRDX4Q13162 271 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 HLXQ14774 488 aaPredicted RBP19.94■□□□□ 0.78
VPS16-201ENST00000380443 CEACAM21Q3KPI0 293 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 AADACL3Q5VUY0 350 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 ELP2Q6IA86 826 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 ZDHHC23Q8IYP9 409 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 COQ8AQ8NI60 647 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 PAPOLGQ9BWT3 736 aaKnown RBP19.94■□□□□ 0.78
VPS16-201ENST00000380443 ANXA10Q9UJ72 324 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 ST3GAL6Q9Y274 331 aa19.94■□□□□ 0.78
VPS16-201ENST00000380443 ZNF891A8MT65 544 aaPredicted RBP19.93■□□□□ 0.78
VPS16-201ENST00000380443 PDCD6O75340 191 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 IL18BPO95998 194 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 TGFBR3Q03167 851 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 FBXL14Q8N1E6 418 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 OR5A2Q8NGI9 324 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 HIST1H2AAQ96QV6 131 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 MFFQ9GZY8 342 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 CLCF1Q9UBD9 225 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 ZNF230Q9UIE0 474 aaPredicted RBP19.93■□□□□ 0.78
VPS16-201ENST00000380443 AK3Q9UIJ7 227 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 AUP1Q9Y679 476 aa19.93■□□□□ 0.78
VPS16-201ENST00000380443 TRAV14DV4A0A0A6YYC5 116 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 AQP7O14520 342 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 CNOT4O95628 575 aaKnown RBP19.92■□□□□ 0.78
VPS16-201ENST00000380443 RBM11P57052 281 aaKnown RBP19.92■□□□□ 0.78
VPS16-201ENST00000380443 PLEKHN1Q494U1 663 aaPredicted RBP19.92■□□□□ 0.78
VPS16-201ENST00000380443 NHLRC3Q5JS37 347 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 UNQ6494/PRO21346Q6UXR6 183 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 ZNF611Q8N823 705 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 WBP1Q96G27 269 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 RTBDNQ9BSG5 229 aaPredicted RBP19.92■□□□□ 0.78
VPS16-201ENST00000380443 FAAP24Q9BTP7 215 aa19.92■□□□□ 0.78
VPS16-201ENST00000380443 GSX2Q9BZM3 304 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms