RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 TMEM225Q6GV28 225 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 WBP2NLQ6ICG8 309 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 AGTRAPQ6RW13 159 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 ZNF440Q8IYI8 595 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 LILRA3Q8N6C8 439 aaPredicted RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 OR6N2Q8NGY6 317 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 KLK6Q92876 244 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 RSPRY1Q96DX4 576 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 BTF3L4Q96K17 158 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 HINT2Q9BX68 163 aa8.27□□□□□ -1.09
PTPRA-204ENST00000380393 SIDT1Q9NXL6 827 aaKnown RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 CGGBP1Q9UFW8 167 aaPredicted RBP8.27□□□□□ -1.09
PTPRA-204ENST00000380393 PPIAL4EA0A075B759 164 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 PPIAL4CA0A0B4J2A2 164 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 PPIAL4DF5H284 164 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 G3V4G9 280 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 CDIPTO14735 213 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 TBL1XO60907 577 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 PPIAL4FP0DN26 164 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 ADRA2CP18825 462 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 FUT5Q11128 374 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 TMEM177Q53S58 311 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 AMMECR1LQ6DCA0 310 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 IGF2-ASQ6U949 168 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 ZDHHC22Q8N966 263 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 OR52E1Q8NGJ3 308 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 OR1K1Q8NGR3 316 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 ASB11Q8WXH4 323 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 ASB10Q8WXI3 467 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 OR10C1Q96KK4 312 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 GTSF1LQ9H1H1 148 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 ZNF703Q9H7S9 590 aaPredicted RBP8.26□□□□□ -1.09
PTPRA-204ENST00000380393 ZMAT3Q9HA38 289 aaKnown RBP8.26□□□□□ -1.09
PTPRA-204ENST00000380393 IL23AQ9NPF7 189 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 KIF26AQ9ULI4 1882 aaPredicted RBP8.26□□□□□ -1.09
PTPRA-204ENST00000380393 MAP1LC3B2A6NCE7 125 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 NUPR1O60356 82 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 F11P03951 625 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 FAM3BP58499 235 aaPredicted RBP8.26□□□□□ -1.09
PTPRA-204ENST00000380393 HERV-K104P63124 156 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 FIGLAQ6QHK4 219 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 TCF24Q7RTU0 167 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 MDGA2Q7Z553 956 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 ZNF584Q8IVC4 421 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 SUN3Q8TAQ9 357 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 HSPB9Q9BQS6 159 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 MAP1LC3BQ9GZQ8 125 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 PLK3Q9H4B4 646 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 HIF1ANQ9NWT6 349 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 YIPF1Q9Y548 306 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 SPTBP11277 2137 aa8.26□□□□□ -1.09
PTPRA-204ENST00000380393 TNFSF15O95150 251 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 DDAH2O95865 285 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 IGLC2P0DOY2 106 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 IGLC3P0DOY3 106 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OTX1P32242 354 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 PNRC1Q12796 327 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 FZD2Q14332 565 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 BSXQ3C1V8 233 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 COMMD2Q86X83 199 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR2Z1Q8NG97 314 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 CMTM2Q8TAZ6 248 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 SCAMP4Q969E2 229 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 C2orf50Q96LR7 162 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR7D2Q96RA2 312 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 FBRSQ9HAH7 460 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 HSPB1P04792 205 aaKnown RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 STAG3L2P0CL84 134 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 SLC6A12P48065 614 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 ICAM4Q14773 271 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 PRSS53Q2L4Q9 553 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 HNRNPA1L2Q32P51 320 aaKnown RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 TMEM184AQ6ZMB5 413 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 THSD4Q6ZMP0 1018 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 TGIF2LYQ8IUE0 185 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR8I2Q8N0Y5 310 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 FER1L6-AS1Q8NA97 138 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 ZNF740Q8NDX6 193 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR4D6Q8NGJ1 314 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 FGF13Q92913 245 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 RAB18Q9NP72 206 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 PGPEP1Q9NXJ5 209 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 FRRS1LQ9P0K9 344 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 DNAH14Q0VDD8 3507 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 IGHV1-69-2A0A0G2JMI3 117 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 TMEM202A6NGA9 273 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 NPIPB15A6NHN6 443 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR10J4P0C629 311 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 JMJD7P0C870 316 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 GABRA3P34903 492 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 ARRB1P49407 418 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 PSG3Q16557 428 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR52L1Q8NGH7 329 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 C2orf15Q8WU43 125 aaKnown RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 ZNF689Q96CS4 500 aaPredicted RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 STARD4Q96DR4 205 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR5B12Q96R08 314 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 PATZ1Q9HBE1 687 aaKnown RBP8.25□□□□□ -1.09
PTPRA-204ENST00000380393 CMC2Q9NRP2 79 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms