RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 CAMLGP49069 296 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 ZNF84P51523 738 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 TAS2R31P59538 309 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 IL11RAQ14626 422 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 SURF2Q15527 256 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 EIF5AL1Q6IS14 154 aaKnown RBP12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 MRPL14Q6P1L8 145 aaKnown RBP12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 HIST2H3AQ71DI3 136 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 OR5H2Q8NGV7 314 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 OR51E1Q8TCB6 317 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 DAZLQ92904 295 aaKnown RBP12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 CNTNAP3Q9BZ76 1288 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 CHST5Q9GZS9 411 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 WWTR1Q9GZV5 400 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 COL27A1Q8IZC6 1860 aaPredicted RBP12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 IGLV3-12A0A075B6K2 115 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 F10P00742 488 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 FBXW4P57775 412 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 GLO1Q04760 184 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 SSX9Q7RTT3 188 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 COPS7AQ9UBW8 275 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 HDGFL3Q9Y3E1 203 aa12.14□□□□□ -0.47
SNCAIP-203ENST00000379538 TRBV11-1A0A0K0K1C0 115 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 CRTAPO75718 401 aaPredicted RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 SOD3P08294 240 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 H2BFMP0C1H6 154 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 ZNF823P16415 610 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 TCN2P20062 427 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 OR3A2P47893 321 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 RNF4P78317 190 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 HAGHQ16775 308 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 C4orf17Q53FE4 359 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 TSPO2Q5TGU0 170 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 CYB5R2Q6BCY4 276 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 ZNF529Q6P280 563 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 FIP1L1Q6UN15 594 aaKnown RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 HEPN1Q6WQI6 88 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 C1QL2Q7Z5L3 287 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 SLC22A24Q8N4F4 322 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 OR56B1Q8NGI3 324 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 GTF3AQ92664 365 aaKnown RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 SGK3Q96BR1 496 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 KCNJ16Q9NPI9 418 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 EML6Q6ZMW3 1958 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 VSTM2BA6NLU5 285 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 ST8SIA5O15466 376 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 RAB5CP51148 216 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 SNU13P55769 128 aaKnown RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 RAP1AP62834 184 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 CSNK2A1P68400 391 aaPredicted RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 NHLH2Q02577 135 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 ZNF674Q2M3X9 581 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 C1orf140Q5VVS0 124 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 HLA-DQA1Q5Y7H0 255 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 RPUSD3Q6P087 351 aaKnown RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 PLPP5Q8NEB5 264 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 CSNK2A3Q8NEV1 391 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 LYPD6BQ8NI32 183 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 SLC39A7Q92504 469 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 THRSPQ92748 146 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 PTX4Q96A99 478 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 HDHD3Q9BSH5 251 aaPredicted RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 SUCNR1Q9BXA5 334 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 GAR1Q9NY12 217 aaKnown RBP12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 HS3ST3B1Q9Y662 390 aa12.13□□□□□ -0.47
SNCAIP-203ENST00000379538 TGIF2-C20orf24A0A0A6YYL0 155 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 TMEM14DPA8MWL7 114 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 MT-CO3P00414 261 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 HIST1H1DP16402 221 aaKnown RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 S100A2P29034 98 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 CDX1P47902 265 aaPredicted RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 PLCXD2Q0VAA5 305 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 DCAF12Q5T6F0 453 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 CPEB2Q7Z5Q1 589 aaKnown RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 NKAIN3Q8N8D7 197 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 UBAC2Q8NBM4 344 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 NFAM1Q8NET5 270 aaPredicted RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 OR1J1Q8NGS3 322 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 NTNG2Q96CW9 530 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 SLC46A1Q96NT5 459 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 ADAM19Q9H013 955 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 DNAJB11Q9UBS4 358 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 PRODH2Q9UF12 536 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 MRPS28Q9Y2Q9 187 aaKnown RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 C5orf63A6NC05 138 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 CDRT15L2A8MXV6 281 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 H0YL77 283 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 IFNA17P01571 189 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 OPN1LWP04000 364 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 MDKP21741 143 aaPredicted RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 NOVA1P51513 510 aaKnown RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 PLXDC2Q6UX71 529 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 TMEM182Q6ZP80 229 aaPredicted RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 MAMDC2Q7Z304 686 aaPredicted RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 FAM213BQ8TBF2 198 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 Q8WTZ3 238 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 CA5BP1Q8WTZ4 195 aa12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 FAM71F1Q96KD3 344 aaPredicted RBP12.12□□□□□ -0.47
SNCAIP-203ENST00000379538 C1orf147Q96MC9 270 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms